DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and CG30273

DIOPT Version :10

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_726223.1 Gene:CG30273 / 246520 FlyBaseID:FBgn0050273 Length:128 Species:Drosophila melanogaster


Alignment Length:116 Identity:27/116 - (23%)
Similarity:47/116 - (40%) Gaps:31/116 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PPPSYEEAMGWE--TRRSHSTT----WLLAENTSSLMI--------CPMCH----DEIETTTKIR 57
            ||||||:.:..:  .|..|.||    .::.::.:.|.:        ||.||    ..:|.:..::
  Fly    18 PPPSYEQVVHVQAPVRVVHHTTAPPPVVIIQHQAVLPVGPDPTFITCPHCHVQKLTRVEYSPSVK 82

  Fly    58 RRWIAYVASGIVLFTTCGIGCWLIPCI----LDCFNEIHHSCPVCKATLGI 104
            ...:|.:        .|.:|.|...|:    ..|.| .:|.|..|...:|:
  Fly    83 THCMAAI--------LCIVGLWCCACLPYCATSCMN-ANHFCGNCNKFVGV 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 17/83 (20%)
CG30273NP_726223.1 zf-LITAF-like 57..126 CDD:463165 16/77 (21%)

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