DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33855 and si:ch211-113a14.18

DIOPT Version :9

Sequence 1:NP_001027369.1 Gene:His1:CG33855 / 3771991 FlyBaseID:FBgn0053855 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_001331207.2 Gene:si:ch211-113a14.18 / 792275 ZFINID:ZDB-GENE-121214-116 Length:199 Species:Danio rerio


Alignment Length:228 Identity:92/228 - (40%)
Similarity:117/228 - (51%) Gaps:41/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGGSSLLAIKKYITA- 77
            |||||...||        .|.:|.|||.     |..:.::..::...|||.|.||.|:||.::| 
Zfish     7 AAPPAKAPKK--------KAASKPKKAG-----PNVRDLIVKTVTASKERHGVSLAALKKALSAG 58

  Fly    78 TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQS 142
            .|  |.:|....:|..:|:.|.||.|:||||.||||||||:   ||:.:||              
Zfish    59 GY--DVEKNNSRVKTAVKALVTNGTLVQTKGTGASGSFKLN---KKQAEPK-------------- 104

  Fly   143 KKVASKKIGVSSKKTAVGAADKKP-KAKKAVATKKTAENKKTEK--AKAKDAKKTGIIKSKPAAT 204
            ||.|:||..|.:||.   ||.|.| |.||..|.||..::.|..|  |.||.|.|:.....||||.
Zfish   105 KKPAAKKTAVKAKKP---AAKKSPKKVKKPAAVKKATKSPKKAKKPAAAKKATKSPKKAKKPAAA 166

  Fly   205 KAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKK 237
            | |.|.:..||.:||....||. :|||||...|
Zfish   167 K-KATKSPKKAKVAKPKTVKPK-AAKPKKAAPK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33855NP_001027369.1 Linker_histone 46..118 CDD:278939 31/72 (43%)
si:ch211-113a14.18XP_001331207.2 Linker_histone 27..97 CDD:278939 31/71 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I11086
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4847
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11467
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X117
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.960

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