DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33855 and hil-6

DIOPT Version :9

Sequence 1:NP_001027369.1 Gene:His1:CG33855 / 3771991 FlyBaseID:FBgn0053855 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_503554.1 Gene:hil-6 / 186584 WormBaseID:WBGene00001857 Length:190 Species:Caenorhabditis elegans


Alignment Length:207 Identity:84/207 - (40%)
Similarity:105/207 - (50%) Gaps:25/207 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |||.|||  .:|....|.         ||..:..||..|.....:|||...||.|:|.:||||.|
 Worm     1 MSDVAVA--ETPAVKTPT---------KAPKANATKVPKVKTAAAHPPFINMVTAAISSLKERKG 54

  Fly    66 SSLLAIKKYITATYKCDAQ--KLAPFIKKYLKSAVVNGKLIQTKGKGASGSF----KLSASAKKE 124
            ||.:||.|||||.||...|  |:...::..||..|.:..|:||.|.||:|.|    |.:|:|||.
 Worm    55 SSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVGTGATGRFRVAEKTAATAKKP 119

  Fly   125 KDPKAKS--KVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAK 187
            ...||.:  ||    ||...||..:||.|...||........||.|||  |||..::....:||.
 Worm   120 TVKKAATGEKV----KKTVVKKTVAKKTGDKVKKAKSPKKIAKPAAKK--ATKSPSKKVAPKKAA 178

  Fly   188 AKDAKKTGIIKS 199
            ||.||||..:|:
 Worm   179 AKPAKKTAALKA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33855NP_001027369.1 Linker_histone 46..118 CDD:278939 37/77 (48%)
hil-6NP_503554.1 Linker_histone 35..109 CDD:278939 36/73 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I6615
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I3461
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55300
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 1 1.000 - - mtm4774
orthoMCL 1 0.900 - - OOG6_110754
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2142
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.800

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