DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33855 and his-24

DIOPT Version :9

Sequence 1:NP_001027369.1 Gene:His1:CG33855 / 3771991 FlyBaseID:FBgn0053855 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_510410.1 Gene:his-24 / 181545 WormBaseID:WBGene00001898 Length:208 Species:Caenorhabditis elegans


Alignment Length:253 Identity:91/253 - (35%)
Similarity:121/253 - (47%) Gaps:49/253 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSA-GTKAKKASATPSHPPTQQMVDASIKNLKERG 64
            ||||||..:|         ||.||.:.||:.:| .||..||.|..:|||...|:..:||.||:|.
 Worm     1 MSDSAVVAAA---------VEPKVPKAKAAKAAKPTKVAKAKAPVAHPPYINMIKEAIKQLKDRK 56

  Fly    65 GSSLLAIKKYITATYKC--DAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDP 127
            |:|..||.|:|:..||.  :..::...:::.||..|.:..|:|..|.||:|.|::...|...|.|
 Worm    57 GASKQAILKFISQNYKLGDNVIQINAHLRQALKRGVTSKALVQAAGSGANGRFRVPEKAAAAKKP 121

  Fly   128 KAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAK 192
            .|..|..:|:|...:||...:|            ..|||.|.|   .||.|...|..| |||..|
 Worm   122 AAAKKPAAAKKPAAAKKATGEK------------KAKKPAAAK---PKKAATGDKKVK-KAKSPK 170

  Fly   193 KTGIIKSKPAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKKASVSATAKKPKAK 250
            |.    :||||.|           :||:    ||..|.|||..|.|:..|.  ||.||
 Worm   171 KV----AKPAAKK-----------VAKS----PAKKAAPKKIAKPAAKKAA--KPAAK 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33855NP_001027369.1 Linker_histone 46..118 CDD:278939 27/73 (37%)
his-24NP_510410.1 Linker_histone 38..112 CDD:366156 27/73 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I6615
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I3461
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55300
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 1 1.000 - - mtm4774
orthoMCL 1 0.900 - - OOG6_110754
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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