DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33855 and hil-3

DIOPT Version :9

Sequence 1:NP_001027369.1 Gene:His1:CG33855 / 3771991 FlyBaseID:FBgn0053855 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_509375.1 Gene:hil-3 / 181073 WormBaseID:WBGene00001854 Length:208 Species:Caenorhabditis elegans


Alignment Length:240 Identity:98/240 - (40%)
Similarity:122/240 - (50%) Gaps:38/240 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |||:.||::|  |.||..||      |....:..||..||....:|||...||.|:|..||||.|
 Worm     1 MSDTVVASAA--VQAPAKTV------KSPKAAKTTKVPKAKKPVAHPPYINMVTAAINGLKERKG 57

  Fly    66 SSLLAIKKYITATYKCDAQ--KLAPFIKKYLKSAVVNGKLIQTKGKGASGSF----KLSASAKKE 124
            ||.:||.||||..|....|  |:...::..|...||:..|:|:.|.||||.|    |.:|:||| 
 Worm    58 SSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVGTGASGRFRVTEKKAAAAKK- 121

  Fly   125 KDPKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAK 189
              |.|| |..:.|||.: |.||        :|.|.|  :||.|...|..|||||:..|..|:..|
 Worm   122 --PVAK-KAATGEKKAK-KPVA--------QKAATG--EKKAKKTTATKTKKTADKVKKVKSPKK 172

  Fly   190 DAKKTGIIKSKPAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKT 234
            .||.|.   .|.|.:.||.:|.|      ||:.||||..|...||
 Worm   173 IAKPTA---KKVAKSPAKKSAPK------KAAAAKPAKKAVAPKT 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33855NP_001027369.1 Linker_histone 46..118 CDD:278939 35/77 (45%)
hil-3NP_509375.1 Linker_histone 38..111 CDD:278939 34/72 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I6615
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I3461
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55300
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 1 1.000 - - mtm4774
orthoMCL 1 0.900 - - OOG6_110754
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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