DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33855 and hil-5

DIOPT Version :9

Sequence 1:NP_001027369.1 Gene:His1:CG33855 / 3771991 FlyBaseID:FBgn0053855 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_491678.1 Gene:hil-5 / 172242 WormBaseID:WBGene00001856 Length:225 Species:Caenorhabditis elegans


Alignment Length:262 Identity:99/262 - (37%)
Similarity:125/262 - (47%) Gaps:45/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |||.|||.:       || |:......||:.:..||..|.....:|||...|:..::.|||:|.|
 Worm     1 MSDVAVAET-------PA-VKTPTKASKATKAKATKIPKVKVVAAHPPFINMITEAVSNLKDRKG 57

  Fly    66 SSLLAIKKYITATYKCDAQ--KLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPK 128
            ||.:||.|:|||.|....|  |....::..||..||:..|:||.|.||:|.|:|:.:.|    |.
 Worm    58 SSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKVLVQTNGIGANGRFRLAVAEK----PP 118

  Fly   129 AKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKK 193
            |..|..:.|:||. |.||.|.:          :.|   ||||.|| |||.:..|    |.|..|:
 Worm   119 AVKKAATGEQKVM-KTVAKKAV----------SGD---KAKKTVA-KKTGDKVK----KVKSPKR 164

  Fly   194 TGIIKSKPAATKAKVTAAKP--KAVIAKASKAKPAVSAKPKK-TVKKASVSATAKKP--KAKTTA 253
            .    :|||..|....||.|  .|....|.|...|..|.||| .|.||   ||.|.|  ||..||
 Worm   165 I----AKPAVKKVTKKAAAPTKSAANETAPKKAAATEAAPKKAAVTKA---ATKKTPARKAVGTA 222

  Fly   254 AK 255
            .|
 Worm   223 PK 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33855NP_001027369.1 Linker_histone 46..118 CDD:278939 32/73 (44%)
hil-5NP_491678.1 Linker_histone 38..112 CDD:278939 32/73 (44%)
HC2 113..>225 CDD:284736 52/142 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I6615
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I3461
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55300
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 1 1.000 - - mtm4774
orthoMCL 1 0.900 - - OOG6_110754
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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