DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33855 and H1f6

DIOPT Version :9

Sequence 1:NP_001027369.1 Gene:His1:CG33855 / 3771991 FlyBaseID:FBgn0053855 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_034507.2 Gene:H1f6 / 107970 MGIID:1888530 Length:209 Species:Mus musculus


Alignment Length:240 Identity:84/240 - (35%)
Similarity:113/240 - (47%) Gaps:48/240 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPP----TQQMVDASIKNLK 61
            ||::|.|.|::.|   ||.||:|...|:       :.||....|:..|    ..:::..::...:
Mouse     1 MSETAPAASSTLV---PAPVEEKPSSKR-------RGKKPGLAPARKPRGFSVSKLIPEALSTSQ 55

  Fly    62 ERGGSSLLAIKKYITAT-YKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEK 125
            ||.|.||.|:||.:.|. |  |.:|....||..||..|..|.|:||||.|||||||||..|....
Mouse    56 ERAGMSLAALKKALAAAGY--DVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGN 118

  Fly   126 DPKAKSKVLSAEKKVQSKKVASKKIGV--------SSKKTAVGAADKKPKAKKAVATKKTAENKK 182
            | |.|.|        :|....:||:|:        |||..||    |||   ||..||.:...:|
Mouse   119 D-KGKGK--------KSASAKAKKMGLPRASRSPKSSKTKAV----KKP---KATPTKASGSGRK 167

  Fly   183 TEKAKAKDAKKTGIIKSKPA-ATKAKVTAAKPKAVIAKASKAKPA 226
            |:.||....:|:      || |..|...:.|.|.|:.|....|.|
Mouse   168 TKGAKGVQQRKS------PAKARAANPNSGKAKMVMQKTDLRKAA 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33855NP_001027369.1 Linker_histone 46..118 CDD:278939 31/76 (41%)
H1f6NP_034507.2 H15 37..117 CDD:238028 34/81 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..209 50/133 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10384
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I4685
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11467
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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