DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and AT5G18900

DIOPT Version :10

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_197391.1 Gene:AT5G18900 / 832008 AraportID:AT5G18900 Length:298 Species:Arabidopsis thaliana


Alignment Length:233 Identity:70/233 - (30%)
Similarity:106/233 - (45%) Gaps:39/233 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 TSTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEIDGMLNSSDFGLSESV-----SGLK--SEVR 338
            :|::.|  :.|.|::::...|...|:...:.:.|.|.|::.:...|..|.     ||..  ||||
plant    26 SSSSVF--VNPSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVR 88

  Fly   339 TSKDSHIVDAKT-----LNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHD-FHEYTNTTRLKQ 397
            ||..:.|...|.     :.::::..|.|..|..:...::.|..|..:..|.| ||:..|..|  .
plant    89 TSSGTFISKGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVR--G 151

  Fly   398 GDRIATVLFYLREVDSGGATVFP---------------------MLNITVMPKKGSAVFWYNLHN 441
            |.|:||:|.||..|..||.||||                     ...|.|.|:||.|:.::|||.
plant   152 GHRMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKEDLSDCAKRGIAVKPRKGDALLFFNLHP 216

  Fly   442 SGAVNSKTLHTACPVISGSKYVLTKWIN-ELPQMFVTP 478
            ....:..:||..||||.|.|:..||||: :.....|||
plant   217 DAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFDRIVTP 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..168 CDD:462433
P4Hc 314..468 CDD:214780 59/187 (32%)
AT5G18900NP_197391.1 PLN00052 33..298 CDD:177683 68/224 (30%)
Blue background indicates that the domain is not in the aligned region.

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