DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and AT4G25600

DIOPT Version :10

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_194290.2 Gene:AT4G25600 / 828665 AraportID:AT4G25600 Length:291 Species:Arabidopsis thaliana


Alignment Length:238 Identity:51/238 - (21%)
Similarity:88/238 - (36%) Gaps:71/238 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 KKLHCRYNTSTTPFTR---------IAPLKMEELGLDPYMVVFHDVIYDTEIDGMLNSSDFGLSE 328
            |:|..:..||.:..|:         :.|.::.:|...|.:.::...:.:.|.|.:::        
plant    29 KELRDKEITSKSDDTQASYVLGSKFVDPTRVLQLSWLPRVFLYRGFLSEEECDHLIS-------- 85

  Fly   329 SVSGLKSEVRTSKDSHIVDAKT--------LNERVTDMTGLSMEMSDPFSLINY----------- 374
                |:.|. |...|...|.||        :.|:|:..|.|..|......:.:|           
plant    86 ----LRKET-TEVYSVDADGKTQLDPVVAGIEEKVSAWTFLPGENGGSIKVRSYTSEKSGKKLDY 145

  Fly   375 -GLGGHFILHHDFHEYTNTTRLKQGDRIATVLFYLREVDSGGATVFPMLNITVMPK--------- 429
             |.....:||...              :|||:.||.....||..:||  |..:.||         
plant   146 FGEEPSSVLHESL--------------LATVVLYLSNTTQGGELLFP--NSEMKPKNSCLEGGNI 194

  Fly   430 ----KGSAVFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWI 468
                ||:|:.::....:.:::.|:.|..|||:.|...|.||.|
plant   195 LRPVKGNAILFFTRLLNASLDGKSTHLRCPVVKGELLVATKLI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..168 CDD:462433
P4Hc 314..468 CDD:214780 42/186 (23%)
AT4G25600NP_194290.2 PLN00052 55..291 CDD:177683 46/212 (22%)
Blue background indicates that the domain is not in the aligned region.

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