DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and AT3G28490

DIOPT Version :10

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_189490.2 Gene:AT3G28490 / 822479 AraportID:AT3G28490 Length:288 Species:Arabidopsis thaliana


Alignment Length:217 Identity:63/217 - (29%)
Similarity:92/217 - (42%) Gaps:42/217 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 IAPLKMEELGLDPYMVVFHDVIYDTEID-------GMLNSS------DFGLSESVSGLKSEVRTS 340
            :.|.::.:|...|...::...:.|.|.|       |.|..|      |.|.||.     ||||||
plant    27 VDPTRITQLSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGESED-----SEVRTS 86

  Fly   341 KDSHIVDAK-----TLNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDFHEYTNTTRLKQGDR 400
            ....:...:     .:..::...|.|..|..:...:::|..|..:..|.|:. |........|.|
plant    87 SGMFLTKRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDYF-YDKKALELGGHR 150

  Fly   401 IATVLFYLREVDSGGATVFP------------------MLNITVMPKKGSAVFWYNLHNSGAVNS 447
            |||||.||..|..||.||||                  .....|.|:||.|:.::|||.:|..:.
plant   151 IATVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAKQGYAVKPRKGDALLFFNLHLNGTTDP 215

  Fly   448 KTLHTACPVISGSKYVLTKWIN 469
            .:||.:||||.|.|:..|:||:
plant   216 NSLHGSCPVIEGEKWSATRWIH 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..168 CDD:462433
P4Hc 314..468 CDD:214780 57/189 (30%)
AT3G28490NP_189490.2 PLN00052 28..288 CDD:177683 63/216 (29%)
Blue background indicates that the domain is not in the aligned region.

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