DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and P4ha1

DIOPT Version :10

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:529 Identity:151/529 - (28%)
Similarity:240/529 - (45%) Gaps:102/529 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSF 96
            :..|..::..|:..|.:||.:||.|:|..:.|...:::....:.|.......|.|.::|:|:|:|
  Rat    21 FFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAF 85

  Fly    97 RLIHRLHTSWRKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDLMYFYDLKPEEL 161
            :|:.||:|.|.:.....:|..::  |.|.|..:.|:..|...|...|.:.:..|...|:|....:
  Rat    86 KLMKRLNTEWSELENLILKDMSD--GFISNLTIQRQYFPNDEDQVGAAKALFRLQDTYNLDTNTI 148

  Fly   162 AAGNLAGYSQPGTGLTAYDCLALGEFGVQNQKDDLAEAWYNLSLTRFD----NIIEK-------- 214
            :.|||.|.... :.|||.||..||:...........|.|...:|.:.:    :.::|        
  Rat   149 SKGNLPGVKHK-SFLTAEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEMSTVDKVSVLDYLS 212

  Fly   215 YQVHKAW----ALLLAKNKQLTEAFQHFENKPEGIVASNEVIHFEGVLATTQNCT---------- 265
            |.|::..    ||||.|        :..|..||...|:..:::||.:::..::..          
  Rat   213 YAVYQQGDLDKALLLTK--------KLLELDPEHQRANGNLVYFEYIMSKEKDANKSASGDQSDQ 269

  Fly   266 ---------AVVQKP--------------------SKKLHCRYNT-STTPFTRIAPLKMEELGLD 300
                     ||...|                    .|:|.|||:. :..|...:||.|.|:....
  Rat   270 KTTPKKKGIAVDYLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDK 334

  Fly   301 PYMVVFHDVIYDTEID--------------------GMLNSSDFGLSES--VSGLKSEVRTSKDS 343
            |.::.|||:|.|.||:                    |.|.::.:.:|:|  :||.:..|      
  Rat   335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPV------ 393

  Fly   344 HIVDAKTLNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDF---HEYTNTTRLKQGDRIATVL 405
                ...:|.|:.|:|||.:..::...:.|||:||.:..|.||   .|......|..|:||||.|
  Rat   394 ----VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWL 454

  Fly   406 FYLREVDSGGATVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWINE 470
            ||:.:|.:|||||||.:..:|.||||:|||||||..||..:..|.|.||||:.|:|:|..||::|
  Rat   455 FYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHE 519

  Fly   471 LPQMFVTPC 479
            ..|.|..||
  Rat   520 RGQEFRRPC 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..168 CDD:462433 36/132 (27%)
P4Hc 314..468 CDD:214780 65/178 (37%)
P4ha1NP_742059.2 P4Ha_N 24..155 CDD:462433 36/132 (27%)
TPR 205..238 9/40 (23%)
P4Hc 345..518 CDD:214780 67/182 (37%)

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