DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and PH4alphaEFB

DIOPT Version :9

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:528 Identity:163/528 - (30%)
Similarity:253/528 - (47%) Gaps:105/528 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSFRLIHRL 102
            |:.:|||.|..|:.||:||::..:.|.|.::..:.:..||:.:...|..:|:.||:|::.|..||
  Fly    31 EMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPINAYLLTKRL 95

  Fly   103 HTSWRKWYQYAIKVENNALGH------IENARLMRKML--PTSSDLQQACRGIHDLMYFYDLKPE 159
            .|.||       :|| |.:.|      ::|....|.:|  |:..||..|...:..|...|.|...
  Fly    96 TTDWR-------QVE-NLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDTS 152

  Fly   160 ELAAGNLAGYSQPGTGLTAYDCLALGEFGVQNQKDDLAEAWYNLSLTRF-------------DNI 211
            .:|.|.|.|. |..|.:::.||..||.....|........|.|.::.|.             .:|
  Fly   153 SVARGKLNGI-QYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMARMLEEPTNHTQSFTKADI 216

  Fly   212 IE--KYQVHKAWAL--LLAKNKQLTEAFQHFE-------------------NKPEGIVASNEVIH 253
            :|  .:..:|...:  .|....:|.:...|.|                   .|.:|...::|:..
  Fly   217 LEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKRFYEKEIAQQLQLRKMKGDDGTDEMPK 281

  Fly   254 FEGVLATTQNCTAVVQ---------------KPS----KKLHCRYNTSTTPFTRIAPLKMEELGL 299
            .:  |...::..|:..               |||    :.|.|||.|:..||.|:.|||:||:..
  Fly   282 SD--LPVAKSDPAIFDMTERRAYEMLCRGELKPSPSDLRSLRCRYVTNRVPFLRLGPLKLEEVHA 344

  Fly   300 DPYMVVFHDVIYDTEID--------------------GMLNSSDFGLSESVSGLKSEVRTSKDSH 344
            |||:|::||.:||:|||                    |.|.::::.:|:|     :.::|.:|..
  Fly   345 DPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYRISKS-----AWLKTQEDRV 404

  Fly   345 IVDAKTLNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDF---HEYTNTTRLKQGDRIATVLF 406
            |   :|:.:|..|||||.|:.::...::|||:|||:..|.||   .|......|..|:|||||||
  Fly   405 I---ETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGNRIATVLF 466

  Fly   407 YLREVDSGGATVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWINEL 471
            |:.:|:.||||||..|:..:.||||:|.||.|||..|..:.:|.|.||||::|:|:|..|||:|.
  Fly   467 YMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTGTKWVSNKWIHER 531

  Fly   472 PQMFVTPC 479
            .|.|..||
  Fly   532 GQEFRRPC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 41/135 (30%)
P4Hc 314..468 CDD:214780 67/176 (38%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 41/135 (30%)
P4Hc 356..529 CDD:214780 70/180 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461818
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.890

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