DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18749 and CG32199

DIOPT Version :9

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster


Alignment Length:519 Identity:163/519 - (31%)
Similarity:261/519 - (50%) Gaps:83/519 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSF 96
            |:.|.|.:|||||:|:.|..||..||:.::.|.:|::.....:.|..:....:.|.|:.||||:|
  Fly     3 YSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAF 67

  Fly    97 RLIHRLHTSWRKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDLMYFYDLKPEEL 161
            .::.||:..|.||.:| ||:. .|...|:...:..|..|...||:.|.:|:..:..|::|..|:|
  Fly    68 PMLRRLNQDWPKWLRY-IKLA-IASKKIKEMEVQLKSAPIDDDLKVALKGMTRIEKFHNLHAEDL 130

  Fly   162 AAGNLAGYSQPGTGLTAYDCLALGEFGVQNQKDDLAEAWYNLSL---TRFDNII-------EKYQ 216
            ..|.|.| .:..:.|||.||:|||::.....:...:..||.::|   |....:|       ::.:
  Fly   131 TKGVLMG-KKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTHPRGMIYAKVLGLKRKR 194

  Fly   217 VHKAWALLLAKN---------------------KQLTEAFQHFENKPEGI---VASNEVIHFEGV 257
            ::|.:|..|.|.                     |::|.. .:::|..:.|   ::.:|.| |:.|
  Fly   195 IYKKYAKALLKESLNSDKSKPTPTEKSEWNRLAKEVTRE-DNYDNVKKLIDEYLSGDEKI-FQEV 257

  Fly   258 LATTQNCTAVVQ---------KPSKKLHCRYNTSTTPFTRIAPLKMEELGLDPYMVVFHDVIYDT 313
            .|..:.....::         |.|.:|.||||..|:.|.::||||:|.|.:.|.::::|||:|:.
  Fly   258 AARLKRKPTKLERGCRGEWPKKSSPELICRYNRDTSAFLKLAPLKLEFLSVQPMILLYHDVLYEN 322

  Fly   314 EID-----GMLNSS--------DFGLSESVSGLKSEVRTSK-----DSHIVDAKTLNERVTDMTG 360
            |..     .|.|.|        ||   :.....|.:.|..|     .:......::|.|:.||:|
  Fly   323 EFKSMRDIAMYNGSMIDGWTYVDF---DKKGNPKQQDRVVKMIAFQGTTAPFTLSINRRMADMSG 384

  Fly   361 LSMEMSDPFSLINYGLGGHFILHHDFHEYTNTTRLKQ---------GDRIATVLFYLREVDSGGA 416
            |.|..:....|.||||||||..|.|:.|..     |:         ||||||.|.|..::..||.
  Fly   385 LEMRDNMVLYLTNYGLGGHFGKHVDYVELA-----KRPPDFFADFGGDRIATALIYASDIPLGGT 444

  Fly   417 TVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWINELPQMFVTPCM 480
            |||..|.|.|.||||||:.|:||:::|..:..|.|:.|||:.||:::::|||:|..|:|..||:
  Fly   445 TVFTKLKIAVQPKKGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIISKWIHERQQVFKKPCL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 44/130 (34%)
P4Hc 314..468 CDD:214780 63/180 (35%)
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 44/130 (34%)
P4Hc <369..497 CDD:214780 55/132 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462006
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.890

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