DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and p4ha2

DIOPT Version :9

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:566 Identity:149/566 - (26%)
Similarity:251/566 - (44%) Gaps:122/566 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYILKKLTFIGFLSACFINCQGFVNSNPKKSYAASTM-ELMKLLEVEDELVDNLKGYVKTLKMKF 64
            :::|..|:|                |:|.::...::: ::..|:..|.|||.:||.|::..:.|.
Zfish     6 VFLLSTLSF----------------SSPTRAEIFTSIGQMTNLIFTERELVQSLKEYIQAEEQKL 54

  Fly    65 NLMERSLIDMSRENMEMKSDYESYLGNPLNSFRLIHRLHTSWRKWYQYAIKVENNALGHIENARL 129
            ..:......:.:......||.|.:|.:|:|:::|:.||:|.|.:  ..::.:::.:.|.|.|..:
Zfish    55 ETVRSWANKLDKLTRTSTSDPEGFLAHPVNAYKLMKRLNTEWSE--LESLVLQDPSDGFISNMSV 117

  Fly   130 MRKMLPTSSDLQQACRGIHDLMYFYDLKPEELAAGNLAGYSQPGTG------LTAYDCLALGEFG 188
            .|:..|...|.:.|.:.:..|...|.|..|..:.|.|.|..| .:|      ||..||..:|:..
Zfish   118 HRQYFPDEEDEKGAAKALLRLQDTYKLDAESFSKGKLPGQRQ-HSGVRYNALLTVDDCFDMGKMA 181

  Fly   189 VQNQKDDLAEAWYNLSLTRFDNIIE------------KYQVHKAWAL---------LLAKNKQLT 232
            ..:.....:..|...||.:.|:..|            .|.|::...|         |||.:....
Zfish   182 YNDNDYYHSVLWMQQSLRQMDSGEEAKTPKADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQ 246

  Fly   233 EA---FQHFE----------------------------NKPEGIVASNE----VIHFEGVLATTQ 262
            .|   .::||                            .:|:..:...|    :...|||..|| 
Zfish   247 RAGGNLRYFERLLSKELQDSGQTQPEPADERPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTT- 310

  Fly   263 NCTAVVQKPSKKLHCRY-NTSTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEID---------- 316
                   |...:|.||| :.:..|...:.|:|.|:....|::|.|.:.:.|.||.          
Zfish   311 -------KRQSRLFCRYRDGNRNPRLLLKPMKEEDEWDSPHIVRFLEALSDEEIQKIKEIATPKL 368

  Fly   317 ----------GMLNSSDFGLSESVSGLKSEVRTSKDSHIVDAKTLNERVTDMTGLSMEMSDPFSL 371
                      |:|..:.:.:|:| :.|:.|     |..::  ..:|:|:.|:|||:::.::...:
Zfish   369 ARATVRDPKTGVLTVAHYRVSKS-AWLEGE-----DDPVI--ARVNQRIEDITGLTVDTAELLQV 425

  Fly   372 INYGLGGHFILHHDFHEYTNTTRLKQ---GDRIATVLFYLREVDSGGATVFPMLNITVMPKKGSA 433
            .|||:||.:..|.||.........|.   |:|:||.|.|:.:|::|||||||....:|.|:||:|
Zfish   426 ANYGVGGQYEPHFDFSRKDEPDAFKSLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTA 490

  Fly   434 VFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWINELPQMFVTPC 479
            ||||||..||..:.:|.|.||||:.|||:|..|||:|..|.|..||
Zfish   491 VFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWIHERGQEFRRPC 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 32/131 (24%)
P4Hc 314..468 CDD:214780 62/176 (35%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 32/130 (25%)
P4Hc 353..526 CDD:214780 64/180 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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