DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18749 and PH4alphaNE3

DIOPT Version :9

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster


Alignment Length:491 Identity:144/491 - (29%)
Similarity:243/491 - (49%) Gaps:50/491 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FINCQGFVNSNPKKSYAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEM 81
            |...:..:|...::.:..:....|.|::::.||:|||..|.:.:..|.:.::|...::.:.....
  Fly     2 FCKVESTLNWESRQEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSA 66

  Fly    82 KSDYESYLGNPLNSFRLIHRLHTSWRKWYQYAIKVENNALGHIENARLMRKM--LPTSSDLQQAC 144
            |...|.||||||:||.||..::..||    |..:.....:|..|...|.||:  ||...|.::|.
  Fly    67 KGREEEYLGNPLHSFPLIRHMYQDWR----YLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEAS 127

  Fly   145 RGIHDLMYFYDLKPEELAAGNLAGYSQPGTGLTAYDCLALG----EFGVQNQKDDLAEAWYNLSL 205
            ..|..:...|.:.|.::|.|.:.......| |.|.||..:.    ::|...|    |..|..:|.
  Fly   128 VSIFRIAETYGMMPWDMANGLIDNVRFNST-LPALDCFEVAKMYFKWGYFKQ----ALQWITISK 187

  Fly   206 TR----FDNIIE-----KYQVHKAWALLLAKNKQLTEAFQHFENKPEGIVASNEVIHFEGVLATT 261
            .|    :..:.|     :..|....|..|.:..:..||.:...::|:  :|.|.:...:...|..
  Fly   188 ARMKEEYSGVYEVLGMNRQDVALLQARCLVELDRRDEAHEVLLDQPD--LADNSISLLDQFKANP 250

  Fly   262 QN---------------CTAVVQKPSKKLHCRYNTSTTPFTRIAPLKMEELGLDPYMVVFHDVIY 311
            ..               |.:.......|||||||::|:.|..:|||||||:.|:|::||:||::.
  Fly   251 YEAIDSSPKLGEGYKRLCRSSFSPNPSKLHCRYNSTTSAFLILAPLKMEEISLEPHIVVYHDILP 315

  Fly   312 DTEIDGMLNSSDFGL------SESVSGLKSEVRTSKDSHIVDAKTLNERVTDMTGLSMEMSDPFS 370
            |.:|..::..::..|      .::.:..:|..||.....::|  :|.:|:.|:|||.:...:|.:
  Fly   316 DKDIQQLITLAEPLLKPTEMFDDNKNEARSSYRTPLGGPLLD--SLTQRMRDITGLQIRQGNPIN 378

  Fly   371 LINYGLGGHFILHHDFHEYTNTTRLKQGDRIATVLFYLREVDSGGATVFPMLNITVMPKKGSAVF 435
            :|.||.|..:..::||.:..|:.....|||:||.:|||.:...|||||||.||:.|..::|..:|
  Fly   379 IIKYGFGAPYTNYYDFFKKRNSESKGFGDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKVLF 443

  Fly   436 WYNLH-NSGAVNSKTLHTACPVISGSKYVLTKWINE 470
            ||||: ::..:...|:|.||||..|||:|:|.||:|
  Fly   444 WYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 39/132 (30%)
P4Hc 314..468 CDD:214780 55/160 (34%)
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 39/127 (31%)
P4Hc 316..478 CDD:214780 57/163 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461727
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.890

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