DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18749 and P4HA3

DIOPT Version :10

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001275677.1 Gene:P4HA3 / 283208 HGNCID:30135 Length:604 Species:Homo sapiens


Alignment Length:485 Identity:125/485 - (25%)
Similarity:216/485 - (44%) Gaps:104/485 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NPKKSYA-----ASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSR---ENMEMKS 83
            :|:::.|     ::...:.:.|..|..|:..|:.|::.       .|..|.|::|   :.:.:..
Human    20 DPERAAARGDTFSALTSVARALAPERRLLGLLRRYLRG-------EEARLRDLTRFYDKVLSLHE 77

  Fly    84 DYESYLGNPLNSFRLIHRLHTSWRKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIH 148
            |..:.:.|||.:|.||.||.:.||. ..::::...|.....:....:.:.||...||:.|.|.:.
Human    78 DSTTPVANPLLAFTLIKRLQSDWRN-VVHSLEASENIRALKDGYEKVEQDLPAFEDLEGAARALM 141

  Fly   149 DLMYFYDLKPEELAAGNLAGYSQPGTG--------------LTAYDCLALGEFGVQNQKDDLAEA 199
            .|...|.|..:.||    .|..|..||              ||..||..:|:  |.....|...|
Human   142 RLQDVYMLNVKGLA----RGVFQRVTGSAITDLYSPKRLFSLTGDDCFQVGK--VAYDMGDYYHA 200

  Fly   200 --WYNLSLTRF-----------DNIIEKYQVHKAWALLLAKN----KQLTEAFQHFENKPEGIVA 247
              |...:::.|           :..:|....|.|:|...|.|    ..|:..|..:  .|:....
Human   201 IPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVSCALSLSREFLLY--SPDNKRM 263

  Fly   248 SNEVIHFEGVLATTQN---CTAVVQKPS--------------------------KKLHCRYNTST 283
            :..|:.:|.:||.:.|   ..||:|:|:                          ..|:|.|.|::
Human   264 ARNVLKYERLLAESPNHVVAEAVIQRPNIPHLQTRDTYEGLCQTLGSQPTLYQIPSLYCSYETNS 328

  Fly   284 TPFTRIAPLKMEELGLDPYMVVFHDVIYDTEIDGMLNSSDFGLSESV--SG---LKSEVRTSKDS 343
            ..:..:.|::.|.:.|:||:.::||.:.|:|...:...::..|..||  ||   |:.|.|.||.:
Human   329 NAYLLLQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVASGEKQLQVEYRISKSA 393

  Fly   344 HI---VDAK--TLNERVTDMTGLSMEMSDPFS----LINYGLGGHFILHHDFHEYTNTT---RLK 396
            .:   ||.|  |||.|:..:|||  ::..|::    ::|||:|||:..|.| |..:.::   |:|
Human   394 WLKDTVDPKLVTLNHRIAALTGL--DVRPPYAEYLQVVNYGIGGHYEPHFD-HATSPSSPLYRMK 455

  Fly   397 QGDRIATVLFYLREVDSGGATVFPMLNITV 426
            .|:|:||.:.||..|::||||.|...|::|
Human   456 SGNRVATFMIYLSSVEAGGATAFIYANLSV 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..168 CDD:462433 32/135 (24%)
P4Hc 314..468 CDD:214780 47/130 (36%)
P4HA3NP_001275677.1 P4Ha_N 58..160 CDD:462433 28/106 (26%)
BepA <188..289 CDD:443813 22/104 (21%)
P4Hc 356..>478 CDD:214780 45/124 (36%)

Return to query results.
Submit another query.