DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18749 and P4ha2

DIOPT Version :9

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_006532515.1 Gene:P4ha2 / 18452 MGIID:894286 Length:557 Species:Mus musculus


Alignment Length:549 Identity:151/549 - (27%)
Similarity:241/549 - (43%) Gaps:123/549 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSF 96
            :..|...:..|:..|.:||.:||.|:...:.|...::.....|........:|.|.||.:|:|::
Mouse    25 FFTSIGHMTDLIYAEKDLVQSLKEYILVEEAKLAKIKSWASKMEALTSRSAADPEGYLAHPVNAY 89

  Fly    97 RLIHRLHTSWRKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDLMYFYDLKPEEL 161
            :|:.||:|.|.....  :.:::.:.|.:.|..:.|:..||..|...|.|.:..|...|.|.|:.:
Mouse    90 KLVKRLNTDWPALGD--LVLQDASAGFVANLSVQRQFFPTDEDESGAARALMRLQDTYKLDPDTI 152

  Fly   162 AAGNLAGYSQPGTG----LTAYDCLALGEFGVQNQKDDL-AEAWYNLSLTRFD---------NII 212
            :.|.|     |||.    |:..||..||. ...|:.|.. ...|....|.:.|         :::
Mouse   153 SRGEL-----PGTKYQAMLSVDDCFGLGR-SAYNEGDYYHTVLWMEQVLKQLDAGEEATVTKSLV 211

  Fly   213 EKY---------QVHKAWAL---LLAKNKQLTEA------FQHFENKPEGIVASNEVIHFEGVLA 259
            ..|         .:|:|..|   ||:.:.....|      |:....:..|...||:.   :..||
Mouse   212 LDYLSYAVFQLGDLHRAVELTRRLLSLDPSHERAGGNLRYFERLLEEERGKSLSNQT---DAGLA 273

  Fly   260 TTQNCTAVVQKPS-------------------------KKLHCRY-NTSTTPFTRIAPLKMEELG 298
            |.:|   :.::|:                         |||.||| :.:..|...|||.|.|:..
Mouse   274 TQEN---LYERPTDYLPERDVYESLCRGEGVKLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEW 335

  Fly   299 LDPYMVVFHDVIYDTEID--------------------GMLNSSDFGLSESVSGLKSEVRTSKDS 343
            ..|::|.::||:.|.||:                    |:|..:.:.:|:| |.|:.:     |.
Mouse   336 DSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKS-SWLEED-----DD 394

  Fly   344 HIVDAKTLNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDF---------------------- 386
            .:|  ..:|.|:..:|||:::.::...:.|||:||.:..|.||                      
Mouse   395 PVV--ARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSGLKTEGNRLATFLNY 457

  Fly   387 -HEYTNTTRLKQGDRIATVLFYLREVDSGGATVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTL 450
             .|.....||..|:|:||.|.|:.:|::|||||||.|...:.||||:|||||||..||..:.:|.
Mouse   458 SDEQDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTR 522

  Fly   451 HTACPVISGSKYVLTKWINELPQMFVTPC 479
            |.||||:.|.|:|..||.:|..|.|:.||
Mouse   523 HAACPVLVGCKWVSNKWFHERGQEFLRPC 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 34/130 (26%)
P4Hc 314..468 CDD:214780 64/196 (33%)
P4ha2XP_006532515.1 P4Ha_N 28..157 CDD:369820 34/130 (26%)
P4Hc 348..541 CDD:214780 66/200 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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