DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18749 and phy-2

DIOPT Version :9

Sequence 1:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:510 Identity:151/510 - (29%)
Similarity:242/510 - (47%) Gaps:83/510 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSFRLIHRL 102
            :|..:|..|.::...:..|::..:.:.:.:.|...:....|...:|....::.||:|::.||.||
 Worm    24 DLQHMLGAEKDVTTIIDQYIEAERARLDDLRRYAHEYVHRNAHAESVGPEFVTNPINAYLLIKRL 88

  Fly   103 HTSWRKWYQYAIKVENNA---LGHIENARLMRKM-LPTSSDLQQACRGIHDLMYFYDLKPEELAA 163
            .|.|:|...  |.:.|.|   |.:|.:.|:..:: .|...||..|...:..|...|.|...:|:.
 Worm    89 TTEWKKVEN--IMLNNKASTFLKNITDNRVRSEVKFPGEEDLSGAATALLRLQDTYSLDTLDLSN 151

  Fly   164 GNLAGYSQPGTGLTAYDCLALGEFGVQNQKDDL-AEAWYNLSLTRFDN----IIEKYQV--HKAW 221
            |.:.| .:....|:.:|...:|. ...||||.. ...|..::|.:.:|    .||::::  :.|:
 Worm   152 GIIGG-EKVSNKLSGHDTFEVGR-SAYNQKDYYHCLMWMQVALVKIENENPPTIEEWEILEYLAY 214

  Fly   222 AL--------LLAKNKQLTE-AFQH---------FENKPEG---------IVASNEVIHFEGVL- 258
            :|        .|:..|:|.: |..|         :|:..:|         ||  |:.:.::|:: 
 Worm   215 SLYQQGNVRRALSLTKRLAKIAPNHPRAKGNVKWYEDMLQGKDMVGDLPPIV--NKRVEYDGIVE 277

  Fly   259 --ATTQNCTA----VVQKPSKKLHCRYNTSTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEID- 316
              |....|..    |..|...||.| |.....||.::||:|:|.|..||..|:|.:||:|:||: 
 Worm   278 RDAYEALCRGEIPPVEPKWKNKLRC-YLKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEV 341

  Fly   317 -------------------GMLNSSDFGLSESVSGLKSEVRTSKDSHIVDAKTLNERVTDMTGLS 362
                               |.|..:.:.:|:| :.||.::     ..::|  .:|.|:.|.|.|:
 Worm   342 IKELASPKLKRATVQNSKTGELEHATYRISKS-AWLKGDL-----DPVID--RVNRRIEDFTNLN 398

  Fly   363 MEMSDPFSLINYGLGGHFILHHDF--HEYTNTTR-LKQGDRIATVLFYLREVDSGGATVFPMLNI 424
            ...|:...:.|||||||:..|.||  .|..|..: |..|:||||||||:.:.:.||||||..|..
 Worm   399 QATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHLGT 463

  Fly   425 TVMPKKGSAVFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWINELPQMFVTPC 479
            .|.|.|..|:|||||...|..:.:|.|.||||:.|.|:|..|||:|..|.|..||
 Worm   464 AVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQEFTRPC 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 32/131 (24%)
P4Hc 314..468 CDD:214780 64/176 (36%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 32/131 (24%)
TPR_16 169..240 CDD:290168 16/71 (23%)
P4Hc 335..508 CDD:214780 66/180 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

Return to query results.
Submit another query.