| Sequence 1: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005251033.1 | Gene: | PLEC / 5339 | HGNCID: | 9069 | Length: | 4689 | Species: | Homo sapiens |
| Alignment Length: | 3740 | Identity: | 740/3740 - (19%) |
|---|---|---|---|
| Similarity: | 1289/3740 - (34%) | Gaps: | 1154/3740 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 10286 HVEELAAPAAVTAETEASMPVEEIWPTSPETGNSLTLEQYEFEPQSPHEESTKSDLVKPQE---- 10346
Fly 10347 -TEPQVVAETKPEGITTGSITITKTTTTITSSTEVPEETLVQNVPADEQQPPANK---------- 10400
Fly 10401 -IK----------TDIQSFLEAEQTLAAALKEQS--STPTGASVAEDVQTQPEEIVLE---ERTV 10449
Fly 10450 EISTIKTEENQQEPVIVEEVKSLPVEPEPVEPELEEVAIAIVEQTEEKPEEPVIEKQPASGPIDL 10514
Fly 10515 RAATQLFISGEAAASTAPQKTFQISAPSLEDNGAGVLKVVLGKESTN-EEDTAAPTTGKVSMTII 10578
Fly 10579 ETAAAPAADAKRRRKKKKRRDTKHEEELEQEQETEPEPVAAVKEPEVSSDVPVSPEDSPRDTVRH 10643
Fly 10644 ESIVEISPDSDLSSIEIDTKVKIVEDAVVSSPSESPRTPMVELVIPTEVVELALVEDEE------ 10702
Fly 10703 ----QQTTP----RIPSPTEKSEV---------EQDIKSVQTSPQHQPKLD---ETAVQT-SLEV 10746
Fly 10747 QPD----NQENESQTLIVEITETEAQTTPRSE-EQSVAVEISTTEIQTDVSGQPAETVEISSQTT 10806
Fly 10807 VTTTIEKELQTTPKDSPRAPEAGSS-DVVESLVQDLVKDMTTDLPVRTSEQSTVTETTTTTETHV 10870
Fly 10871 QTTTPEPREQTEVIKPETAHEETSTVELVQFADGEMQTTPPGDQQPASLDDSSLTATSISVSEPY 10935
Fly 10936 ELEVKTTVAIPADSDTSVAEPTV-------------YEYTQTMQLPKQEKKSKKDKKKKQKNVPE 10987
Fly 10988 VEQQLPEDQQISVTVEIAPELLSESGIVVSTNQQIEDVPHVTPVVDTPIESEEVETPKAQ----- 11047
Fly 11048 ----RVQLQITKTTVYDEYPDLPVHITEQNKVLIASQQSKRS-GAGPTSSAVTI-----EEVG-- 11100
Fly 11101 ----------------------SPTEELVVPITPGPDNLSGEPHNIWFSATTSVDKTPIELSQAL 11143
Fly 11144 IMSE--------------------------SLQHYPGQQKLTQEPI---LISTKEAIGDRIKQLK 11179
Fly 11180 QASPQQATPLSNVL-HLATLSEQIKEL----------PTEQR--ILEVNEGLKDLDVAIKNGDKT 11231
Fly 11232 VIQTTVITVIEKVSTW-----------LETIEYRVYLIRQNSNEGPSEEKLDN------YNQLND 11279
Fly 11280 ELSTI-----KQNVVQLERQLSKA-----EPEPQLLQCVDSLKEHVDAVEQVTQQNQVQDSNDLD 11334
Fly 11335 KW----------------HNFEVLLYNVSSVLADLQQSYDLLINQEYPLSAKLAQLDELEQQHEA 11383
Fly 11384 AQQQLAHLCQNARAFQRDFPGKKMPQDVHNAFETSKNIAN----------------NIQAERERV 11432
Fly 11433 LQL-------QSLAEEYEQTLKEFTKITVLA----------------------------DKLVES 11462
Fly 11463 PIVSSSLEQLNNEVQKQRKFFVNLSHCRAMLESLEENIDS---------ETREKHSELHKE---- 11514
Fly 11515 ----------LYNRATSLLDKASERSSKLVQAASRWTVLEKGMRDELQWLQVAQQRVPDLSAVTS 11569
Fly 11570 ADYD---QYTTLYQSLSNDISHHYVKMTQLSGIAN---------KLQLLVQAPNL---------- 11612
Fly 11613 -VEETNEALIVLLKLREEVALYLHRLLVFKEIWVQYEQQTDKLEAFVREAEQELRNIQIPSQPTH 11676
Fly 11677 QPIEHMRQFWEIKARFELHNNVRTDTGLSFEKSLQVIPLADEMLQRQFHAQLEDRWQAVAQAIEL 11741
Fly 11742 IQHNIVECLSSED--VPADEKLKMVERELQEIYLTMTSMKGVIKNEEELCLYIERVQVL-RTRVG 11803
Fly 11804 FIGNELGRIGLQEPAIEPEK---VGELFSL---SHKISTQIAEELEGASVLRDQLQAIQEGISNQ 11862
Fly 11863 RKHQAKI---SVILDECEAA-ERQGA-DVLEKAVADCQAAGEELVISWQEIMRIRQMLHTL---- 11918
Fly 11919 --------PMRLKMSVSPVKLERDISQLQDDHAFLESKCTNIMAILRSRLAVWLRYERQLELVHG 11975
Fly 11976 SVQETDFMMELIRVHGQVDYERLR-KATERLEGLAGDLHNREQLIDELKGAAKPLIE-------- 12031
Fly 12032 ------SCDVQIVEQIESAVQEAVVAWNDTSENLQQLR--TRYQRAVELWDKYRNASAAVKNSID 12088
Fly 12089 QQMDAVKSLEQPLDALQHAKVCQDNLTTQNDRILELRDIVAKIAADVGLDASALMQGE------- 12146
Fly 12147 ------LDALGQRLAECKDAITTLANVAETQDKERKELDKEVTLAKAYFNNVQQDISREAPQNPK 12205
Fly 12206 ESEEQLAALRAHLQTLARTEEQLRQLKERHQNSEVAPSVASSDDDGILEVLALWQKIFQDTFQEY 12270
Fly 12271 HRLSTRLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSE 12335
Fly 12336 TPLESELSEQYKALTNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQL 12400
Fly 12401 RYIHLKRVPHLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNL 12465
Fly 12466 RAALKTWQGFLQRVTQLSE-----SYEQRVNQLQQEFGAAQKLLD-ANSESLPTQPAAIEQLLGS 12524
Fly 12525 LRAQR--VQLGAQVSALESLTVTQEELKECISPHDMKTIRQRNWLLWQQHADLDYQLANLINSIE 12587
Fly 12588 ERLSLLSNYQIRYDRISQWLQRLEQRVEKDADVTAMTNPEQAAKQLEQQVNSELQLRDKEREWLL 12652
Fly 12653 ----STSRELLTLYSEPEVRSQVQQQSDSLIDRWQRLKYLAKQKATKIGELKMTLLRLEERIALI 12713
Fly 12714 RAWLFEVESQLDKPLNFESYTPNVIEAK-----LKEHEQIQRSIEHHS---SNVGEVLNLVEMLL 12770
Fly 12771 NDADSWRTQVNTSGLAASAQNLEQRWKNVCSQSAERKARILTIWNLLQQLIKLTAEHKNWLGKQE 12835
Fly 12836 SQIA--------GFERDQKSHSKHKLEERQMELRAKLEELESQSVNLRQLE-------QIYAKLA 12885
Fly 12886 MSAGVEPENIQKLTLPTKVMVSMWRQLTPR-------CHALLDAIDKDAKLMREFNNAQLEA--- 12940
Fly 12941 ---TNSLNAIQKALEQL--PSAENQQTSKAEPKAVLQRLESLEKKLQDAQQHVQQADNLAQEAKT 13000
Fly 13001 RTKQQPQLKQLLELVSAYTTLWQTVQTRIVTLKTTWLTRAAQAAASLPVSEAANAAVQVNTLSQR 13065
Fly 13066 KLRQAQQMQRETSITAKDAYIMELQTAITECQNNLDELQRTVVDKTRKPGPQKIA--KLLGNAQS 13128
Fly 13129 STELVKHLSHLLLTECKADDQAAEVDTVAELTLRFDTLQSQWKARQQHDQ---NASEVGRLTCPL 13190
Fly 13191 CTQRNWQQIDNDLWRLE---QWLQFAES------------------TQKAQSAPPSNIELLEDVT 13234
Fly 13235 QDHREFLLD-LESHKSIISSL---NVVGDHLATHTLDTEKA------------------------ 13271
Fly 13272 ------RQLRS--------------RLEAD--------NERWNNVCIN-ATKWQGLLQTALMGNS 13307
Fly 13308 EFHQTIGELVE-------WLQRTEQNIKASEPVDL-TEERSVLE-----TKFKKFKD-------- 13351
Fly 13352 LRAELERCEPR----------VVSLQDAADQLLRSVEGSEQQSQHTYE--RTL--------SRLT 13396
Fly 13397 DLRL---------------RLQSLRR-LSGIYIVKLGAVLGYEGDNLGVPLHMLSSELLDNTTLS 13445
Fly 13446 TSSMQAAAPNTENANNTDGGDAVDGDVINTTVLAR 13480 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
| EnvC | 194..>393 | CDD:443969 | |||
| PTZ00121 | <1704..1881 | CDD:173412 | |||
| SPEC | 9546..9732 | CDD:413338 | |||
| rne | <10668..10827 | CDD:236766 | 44/190 (23%) | ||
| SMC_prok_B | 11268..12195 | CDD:274008 | 230/1111 (21%) | ||
| YhaN | 11930..12426 | CDD:443752 | 108/525 (21%) | ||
| SMC_prok_B | <12205..12954 | CDD:274008 | 173/796 (22%) | ||
| YhaN | 12817..>13241 | CDD:443752 | 103/479 (22%) | ||
| SPEC | 13196..13374 | CDD:238103 | 51/286 (18%) | ||
| KASH | 13484..13540 | CDD:463142 | |||
| PLEC | XP_005251033.1 | S10_plectin | 7..99 | CDD:427337 | 3/14 (21%) |
| CH_PLEC-like_rpt1 | 178..287 | CDD:409037 | 20/135 (15%) | ||
| CH_PLEC_rpt2 | 300..405 | CDD:409087 | 31/150 (21%) | ||
| SPEC | 664..853 | CDD:238103 | 37/234 (16%) | ||
| SPEC | 760..949 | CDD:238103 | 29/197 (15%) | ||
| SH3_10 | 935..1001 | CDD:407754 | 10/71 (14%) | ||
| Spectrin_like | 1036..1113 | CDD:465730 | 20/96 (21%) | ||
| Smc | <1158..>1726 | CDD:440809 | 137/631 (22%) | ||
| Smc | <1456..>2035 | CDD:440809 | 155/703 (22%) | ||
| Smc | <1823..>2391 | CDD:440809 | 158/731 (22%) | ||
| Smc | <2218..2830 | CDD:440809 | 163/754 (22%) | ||
| Plectin | 2833..2871 | CDD:459901 | 5/37 (14%) | ||
| Plectin | 2871..2909 | CDD:459901 | 12/39 (31%) | ||
| PLEC | 2908..2944 | CDD:197605 | 3/35 (9%) | ||
| Plectin | 2947..2985 | CDD:459901 | 5/37 (14%) | ||
| Plectin | 3199..3237 | CDD:459901 | 6/33 (18%) | ||
| PLEC | 3236..3272 | CDD:197605 | |||
| Plectin | 3275..3313 | CDD:459901 | |||
| PLEC | 3492..3526 | CDD:197605 | |||
| Plectin | 3536..3568 | CDD:459901 | |||
| PLEC | 3567..3598 | CDD:197605 | |||
| Plectin | 3606..3644 | CDD:459901 | |||
| PLEC | 3827..3862 | CDD:197605 | |||
| Plectin | 3865..3903 | CDD:459901 | |||
| PLEC | 3902..3938 | CDD:197605 | |||
| Plectin | 3941..3979 | CDD:459901 | |||
| PLEC | 4068..4105 | CDD:197605 | |||
| Plectin | 4108..4146 | CDD:459901 | |||
| Plectin | 4184..4222 | CDD:459901 | |||
| Plectin | <4285..4313 | CDD:459901 | |||
| PLEC | 4417..4450 | CDD:197605 | |||
| Plectin | 4453..4491 | CDD:459901 | |||
| Plectin | 4529..4567 | CDD:459901 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||