Sequence 1: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038969186.1 | Gene: | Syne2 / 366669 | RGDID: | 1305248 | Length: | 6909 | Species: | Rattus norvegicus |
Alignment Length: | 7542 | Identity: | 1391/7542 - (18%) |
---|---|---|---|
Similarity: | 2657/7542 - (35%) | Gaps: | 2022/7542 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 7239 QPEPTPVSEVAPSQPLSWSSIVSQTTEVTTNVTETRFTEEPEDKKPLEEKPKKQKPKKEKKTKVV 7303
Fly 7304 EAPE------------------------PIVESAVPEDVVEPTVEVTFVEEPVVEVTTVVQ-EVK 7343
Fly 7344 PETQPEPTPVSEVAPSQPLSWSSIVSQTTEVTTNVTETRFTEEPEDKK-----PLEEKPKKQKPK 7403
Fly 7404 KEKKTKVVEAPEPIVESAVPEDVVEPTVEVTFVEEPVVEVTTVVEEVTPETQPEPTSVSEVAPSQ 7468
Fly 7469 PLLWSSIVSQTTEDVAE--ALITDVAEDQKPLMEKPKKLKAGKEKKSKVQNVEESILESDVPLS- 7530
Fly 7531 -------VVEPIIGFTTVQKDVPPKTESHTFSWSSIVAQSVE------VPRTIPKHVESKTGGIQ 7582
Fly 7583 NFIAQEQNYSTVV--NDS-------VKKPKPK----------KEKKIV------------QPIQQ 7616
Fly 7617 ---------------------------PTGESVPVRKDHMREGVTKAVPEPQTLSWS------SI 7648
Fly 7649 VSHNIDLTPTFTENRV-IEAVDEINPDDSSSNQEGELPIHVDERKRKPKKDKKRDQNIETSVVYE 7712
Fly 7713 --EIPETERVAVSSTPEFSIQLP---APTKPSVWSSSDTYAE---VVKKSGYNNNTNIK-YQKIE 7768
Fly 7769 AREPIKSEPKH------------TFVEV--------------QTHE-----DLLEFPDPIIPAIE 7802
Fly 7803 RDEALEKPSQLSWKDLVDEDD--VDPLESWHKGETDSVEIKTQKPIQERHSRVSVKPEIQITEVV 7865
Fly 7866 TETQSQSETDQEFLEITSKKRNRSRSRSQQSQASNIDEKHQKKK-----SKKPKNTVPKAPAQQP 7925
Fly 7926 TEAPEDVQPPKESVP-----SVEEPSPPPAPSPNTSGMSWAAIAAHNVPEPVQ-----HIRPLQA 7980
Fly 7981 EAKPTVVED----VRKSTN-------------------------------EHTVNI--PITFETT 8008
Fly 8009 EPKTKKPKQKSKRKLPTDVVDFINAEKSIHQVI-ASKPEIVEEPGSIIVEDVNNTLTSWEIKTPL 8072
Fly 8073 APFE-----FVAESEVEPVSE-SHMEDLPVEKVLKTEPIVESTAVDESKTTTTVTTTTTTTETTS 8131
Fly 8132 NVSIPEEPKKVVEPEKKPEEPKKPAYAGLPVDDSSNSWMDVLDEPMNFSDDEEEPVPEPLKEETL 8196
Fly 8197 VEEVVEEKPIV--EVSVVDDSKSITTV--TTTTTTTETISELPIPEEPK------------KVVE 8245
Fly 8246 PEKKPEEPKKPAYAGLPVDESSSSWMDVLD---EPMNFSDDEEEP-VPEPVKEETLVEEVVEEKP 8306
Fly 8307 IVEVSVVDDSKSITTVTTTTTTTETIS-KLPISEEPKKVVE--------PEKKPEEPKKPAYAGL 8362
Fly 8363 PVDDSSNSWMD-----------VLDEPM-----NFSDDEEEPVPEPVKEETLVEEVV-------- 8403
Fly 8404 -------EEKPIVEVSVVD--DSKSITTVTTTTTTTETISELPIPEEPKKVVEPEKKP------- 8452
Fly 8453 ----EEP----KKPAYAGLP-------------VDDSSNSW-----------------MDVLDEP 8479
Fly 8480 MNFSDD------EEEPV---------PEPVKEETLVEEVVEEKPIVEVSVVDDSKSI-TTVTTTT 8528
Fly 8529 TTTETISELPIPEEPKKVVEPEKKPEEPKKPAYAGLPVDESSSSWMDVLDEPMNFSDDEEEPVPE 8593
Fly 8594 PLKEETVVEEVVEKKPIVEVSVVDDSKTITTVTTTTTTTETISELPIPEEPEKVEQAVVKVEEPK 8658
Fly 8659 KPAYAGLPVDASSSSWMDVLDEPMNFSDSEEEPVPESQTEVTPLAPFKDV------AVDKVQKPV 8717
Fly 8718 ETANISID-------SGNTEAEKTPLAP---------FEEIPDSPLDDAFICETSYWSATLKPGQ 8766
Fly 8767 KPASTVETTETKQEESQPIKVTIPDDEGIDEVAVKSPTDQP---TTWSAIVQTE-TTVFPTPDVQ 8827
Fly 8828 KDNEKTPDWSTHVVSKTTDF----------QE------------PKPLKNVVDS---------EN 8861
Fly 8862 ITTT--------TTTY------------VTTTVTTHKDT-SIVENESPATSYVSTVVTSHKNELD 8905
Fly 8906 LEPEPFELTKPDNLIENLN--REAFKVHPQYEFLQGQYQQLKVVNITKEPYLEEPKEDVPLVED- 8967
Fly 8968 ------YVIIEPEAIPEINSEILALNLYLDQTNILPKTRIDVDTISQLLTLQKSSDPIVEKETVQ 9026
Fly 9027 GETKSVEILVKKSIVESPI--EPIAD-------------------EPLVIETS---QSPPEPSKL 9067
Fly 9068 LWNLSQDN---------------FLKLINHYKQTAGDAFALLPRTTTD----------------- 9100
Fly 9101 --------TTIAQETQDDKQKTDGIT------ETVVTTTTTTITDRVVEKTEPDASSLPIIPTAQ 9151
Fly 9152 PLTAPTLGNLDQLRLNLYLD--------------DWQPASVDAHLADDLFDGLK--------RVD 9194
Fly 9195 VAGSEAE--LDKDKNQEQQPDGDAKKPDGVTGIPDKDDHDSDDDDDDDDDDDDEGGKPTVPEIRK 9257
Fly 9258 PNDDDDKPNDKDPGSGSSGN----------VTPTPEHDAQYGQNRSCSSEYRSTDLPGGV----- 9307
Fly 9308 GHWRDDSTYLALEAEQPQVKLESVPLAPTISGVESVLTETNTTSPAPAPDPVTAPETSPSTTTSS 9372
Fly 9373 LNVANALIQL-----------------------ASATTHTL-----SAKANAAATATHAAAL--- 9406
Fly 9407 --------AATSALLPVATAVVDKLTTTTTAAAETP--------------------AATSDVAAV 9443
Fly 9444 NPYVARATPAATTVAEAATAAAAEIPPAATHTETTTTSSSSGEVVALPTENTGAVRRTTTTTTTV 9508
Fly 9509 ---TTTTTVETPSTTSNTTTTTTTTSSNELQEQRQK-DL-----------------ITQEL---- 9548
Fly 9549 DELLQSLSS---VEDGIANMNQSSLDGMLHGLKLIQSNLEVHERDAI-----ELKNQAKKLPTDP 9605
Fly 9606 ATERLLNDT--VDRIDLLLRRTQQGITMIANA-------------MHGQKKRQQEID-------E 9648
Fly 9649 YQQHLLELEQWIIEVSAELASF-EPTSDSST------DEQV--LKSQVERSQQLLRT----LKDR 9700
Fly 9701 QQSMEDLVEQTRQLQ------SHPDVSPLADTLMEQLQSIITILREQVTV---ATKRIFTIEKRI 9756
Fly 9757 VD----------LRKAKSEEAQRQRVL----------------------------------ADSL 9777
Fly 9778 IKPPTEAP---------------ASPEAHESI-------ESNENTIDSSSMPEEEI--KPTGVYV 9818
Fly 9819 ETQTSLSLQQPPVQVVTTTTVEAQTSFKEPAVETAEV--ALQTQKERSPTENIMVTQTVHHGQET 9881
Fly 9882 IQI------------------------DTTRNKDVPDEPEDVQ---------IEAR-------YH 9906
Fly 9907 QRPKGD--VDRATELI--LKNVPQAFETTFVEPDETTTEVIVGPDGTKHIVLKKVTRTRQQVVQ- 9966
Fly 9967 -----QQQISSIETISDSDGNIEVHSTGQINLENVHTTDTKADPEEGSVHTVITQQTRGAVVDST 10026
Fly 10027 QPEGVILQEFETEPTIETY-------EEVIA----------------PGSQAQ-LIPMQPGDVQT 10067
Fly 10068 QGTIRAVVQQVTRKVIRKTRKIIKRVVIIDGKEHITEE-------VVEEPEEVEITEEETA---P 10122
Fly 10123 HINVNIVRTVDGKVVSEEEFQRMMQEPGVLIEEVATDL-----QKPTAEPQQEVFDIESTQVTTT 10182
Fly 10183 TRTTTATTQEQE-------QPEQQTQ--PTTTETTKEAPV--ELPAPQVDVEQPVVVATTSPVHV 10236
Fly 10237 PTADVVEPKDSSPTSTTAAVVDVEAVVEDINEIW---PLEHH-------------LKPTNIDFSQ 10285
Fly 10286 HVEEL---------AAPAAVTAETE------------ASMPVEEIWPTSPETG------------ 10317
Fly 10318 --------------------------------NSLTLEQYEFEPQSPHEESTKSD-LVKPQETEP 10349
Fly 10350 QVV--AETKPEGITTGSITITKTTTTITSSTEVPEET--LVQNVPA--DEQQPPANKIKTDIQSF 10408
Fly 10409 LEAEQTLAAALKEQSSTPTGASVAEDVQT-----QPEEIV--LEERTVEISTIKTEENQQEPVIV 10466
Fly 10467 EEVKSLPVEPEPVEPELEEVAIAIVE-QTEEKPEEPVIEKQPASGPIDLRAATQLFISGEAAAST 10530
Fly 10531 APQKTFQISAPSLEDNGAGVLKVVLGKESTNEEDTAAPTTGKVSMTIIETAAAPAADAKRRRKKK 10595
Fly 10596 KRRDTKHEEELEQEQETEPEPVAAVKEPEVSSDVPVSPEDSPRDTVRHESIVEISPDSDLSSIEI 10660
Fly 10661 DTKVKIVEDAVVSSPSESPRTPMVELVIPTEVVELALVEDEEQQTTPRIPSP----TEKSEVEQD 10721
Fly 10722 IKSVQ----TSPQHQPKLDETAVQTSLEVQPDNQENESQTLI----VEITETEAQTTPRSEEQSV 10778
Fly 10779 AVEISTTEIQTDVSGQPAETVEISSQTTVTTTIEKELQTTPKDSPR--APEAGSSDVVESLVQDL 10841
Fly 10842 VKDMTTDLPVRTSEQSTVTETTTTTETHVQTTTPEPRE-----QTEVIKPETAHEETSTVELVQF 10901
Fly 10902 ADGEMQTTPPGDQQPASLDDSSLTATSISVSEPYELEVKTTVAIPADSDTSVAEPTVYEYTQTMQ 10966
Fly 10967 LPKQEKKSKKDKKKKQK-NVPEVEQQL----PEDQQISVTVE-------IAPELLSESGIVVSTN 11019
Fly 11020 QQI---EDVPHVTPVVDTPIESEEVETPKAQRVQLQITKTTV--YDEYPDLPVHITEQNKVLIAS 11079
Fly 11080 QQSKRSGAGPTSSAVTIEEVGSPTEELVVPITPGPDNLSGEPHNIWFSATTSVDKTP----IELS 11140
Fly 11141 QALIMS---------------ESLQHYPGQ-QKLTQEPILISTKEAIGDRI-----KQLKQASPQ 11184
Fly 11185 QATPLSNVLHLATLSEQIKELPTEQRI------LEVNEGLKDLDVAI--KNGDKTVIQTTVITVI 11241
Fly 11242 EKVSTWLETIEYRVYLIRQNSNEGPSEEKLDNYNQLNDELSTIKQNVVQLERQLSKAEPEPQLLQ 11306
Fly 11307 CVDSLKEHVDAVEQVTQQNQVQDSNDLDKWHNFEVLLYN--VSSVLADLQQSYDLLINQEYPLSA 11369
Fly 11370 KLAQLDELEQQHEAAQQQLAHLCQNARAFQRDFPGKKMPQDVHNAFETSKNIANNIQAERERVLQ 11434
Fly 11435 LQS--LAEEYEQTLKE--FTKITVLADKLVESPI-VSSSLEQLNNEVQKQRKFFVNLSHCRAMLE 11494
Fly 11495 SLEENIDSETREKHSELHKELYNRATSLLDKASERSSKLVQAASRWTVLEKGMRDELQWLQVAQQ 11559
Fly 11560 RVPDLSAV--TSADYDQYTTLYQSLSNDISHHYVKMTQLSGIANKLQLLVQAPNLVEETNEALIV 11622
Fly 11623 LLK-----LREEVALYLHRLLVFKEIWVQYEQQTDKLEAFVREAEQELRNIQIPSQPTHQPIEHM 11682
Fly 11683 R----QFWEIKARFELHNNVRTDTGLSFEKSLQVIPLADEMLQRQFHAQLEDRWQAVAQAIELIQ 11743
Fly 11744 HNIVECLSSEDVPADEKL------------KMVERELQEIYLTMTSMKGVIKNEEELCLYIERVQ 11796
Fly 11797 VLRTRVGFIGNELGRIGLQEPAIEPEKVGELFSLSHKISTQIAEELEGAS--------VLRDQLQ 11853
Fly 11854 AIQEGISNQRKHQAKISVILDECEAAER--------QGADVLEKAVADCQAAGEELVISWQEIMR 11910
Fly 11911 IRQMLHTL-----PMRLKMSVSPVKLERDISQLQDDHAFLESKCTNIMAILRSRLAVWLRYERQL 11970
Fly 11971 ELVHGSVQETDFMMELIRVHGQ---VDYERLRKATERLEGLAGDLHNREQLIDELKGAAKPLIES 12032
Fly 12033 CDVQIVEQIESAVQEAVVAW----NDTSENLQQLRTRYQRAVELWDKYRNASAAVKNSIDQQ--- 12090
Fly 12091 ---------------------MDAVKSLEQPLDALQHAKVCQDNLTTQNDRILE---------LR 12125
Fly 12126 DIVAKIAADVGLDASALMQGELDALGQRLAECKDAITTLANVAETQDKERKELDK----EVTLAK 12186
Fly 12187 AYFNNVQQDISREAPQNPKESEEQLAALRAHLQTLARTEEQLRQLKERHQNSEVAPSVASSDDDG 12251
Fly 12252 ILEVLALWQKIFQDTFQEYHRLSTRLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDYSSLREQQ 12316
Fly 12317 QL-------CAIHQNL---LISQQSVLSET-------------PLESELSEQYKALTNLHNETLS 12358
Fly 12359 RIMQRNGELERRVSGWNAYRQQLAALLDWL----------RQREAERNALQLRYIH-LK-RVPHL 12411
Fly 12412 KHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAALKTWQGFL 12476
Fly 12477 QRVTQLSESYEQRVNQLQQEFGAAQKLLDANSESLPTQPAAIEQLLGSLRAQRVQLGAQVSALES 12541
Fly 12542 LTVTQEELKECISPHDMKTIRQRNWLLWQQHADLDYQLANLINSIEERLSLLSNYQIRYDRISQW 12606
Fly 12607 LQRLEQRVEKDADVTAMTNPEQAAKQLEQQVNSELQLRDKEREWLLSTSRELLTLYSEPEVRSQV 12671
Fly 12672 QQQSDSLIDRWQRLKYLAKQKATKIGELKMTLLRLEERIALIRAWLFEVESQLDKPLNFESYTPN 12736
Fly 12737 VIEAKLKEHEQIQRSIEHHSSNVGEVLNLVEMLLNDADSWRTQVNTSGLAASAQNLEQRWKNVCS 12801
Fly 12802 QSAERKARILTIWNLLQQLIKLTAEHKNWLGKQESQIAGFERDQKSHSKHKLEERQMELRAKLEE 12866
Fly 12867 LESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKVMV----SMWRQLTPRCHALL------- 12920
Fly 12921 ---------------------------------DAIDKDAKLMREFNNAQLEATNSLNAIQKALE 12952
Fly 12953 QLPSAENQQTSKAEP-KAVL--QRLESL---------------------------EKKLQDAQQH 12987
Fly 12988 VQQADNLAQEA--KTRTKQQPQLKQ-LLELV--------SAYTTLWQTVQTRIVTLKTTWLTRAA 13041
Fly 13042 QAAASLPVSE------AANAAVQVNTLSQRKLRQ-AQQMQRETSITAKDAYIMELQTAITECQNN 13099
Fly 13100 LDELQRTVVDKTRKPGPQKIAKLLGNAQSSTELVKHLSHLLLTECKADDQAAEVDTVAELTLRFD 13164
Fly 13165 TLQSQ-------WKARQQHDQNASEVGRLTCPLCTQRNWQQIDNDLWRLEQWLQ--FAESTQKAQ 13220
Fly 13221 SAPPSNIELLEDVTQDHREFLLDLESHKSIISSLNVVGDHLATHTLDTEKARQLRSRLEADNERW 13285
Fly 13286 NNVCINATKWQGLLQTALMGNSEFHQTIGELVEWLQRTEQNIKASEPVDLTEERSVLETKFKKFK 13350
Fly 13351 DLRAELERCEPRVVSLQDAADQLLRSVEGSE----QQSQHTYERTLSRLTDLRLRLQSLRRLSGI 13411
Fly 13412 YIVKLGAVLGYEGDNLGVPLHMLSSELLDN-TTLSTSSMQAAAPNTENANNTDGGDAVDGDVINT 13475
Fly 13476 TVLARGAR-FLGRVARASLPIQALMLLLLGVATLVPHGE-DYTCMFSNTFARSLEPMLSYPHGPP 13538
Fly 13539 PT 13540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
SPEC | 9546..9732 | CDD:295325 | 48/238 (20%) | ||
sbcc | 11187..12008 | CDD:129705 | 171/882 (19%) | ||
SMC_prok_B | 11614..12442 | CDD:274008 | 172/948 (18%) | ||
SPEC | 11994..12156 | CDD:295325 | 39/198 (20%) | ||
SPEC | 12374..12564 | CDD:295325 | 36/201 (18%) | ||
Lipase_chap | 12376..12529 | CDD:281297 | 28/164 (17%) | ||
SPEC | 12703..12923 | CDD:238103 | 60/263 (23%) | ||
SPEC | 12816..13032 | CDD:295325 | 59/300 (20%) | ||
SPEC | 13196..13374 | CDD:238103 | 49/179 (27%) | ||
KASH | 13484..13540 | CDD:287506 | 33/56 (59%) | ||
Syne2 | XP_038969186.1 | CH_SYNE2_rpt1 | 28..138 | CDD:409091 | |
CH_SYNE2_rpt2 | 180..288 | CDD:409093 | 18/108 (17%) | ||
PRK03918 | <1429..2015 | CDD:235175 | 103/655 (16%) | ||
SPEC | 1949..2129 | CDD:413338 | 35/208 (17%) | ||
SMC_prok_B | 2162..3001 | CDD:274008 | 141/901 (16%) | ||
Smc | 2685..>3388 | CDD:224117 | 125/767 (16%) | ||
Smc | <3457..3750 | CDD:224117 | 52/311 (17%) | ||
SMC_prok_B | <3710..4053 | CDD:274008 | 70/399 (18%) | ||
SPEC | 4943..5167 | CDD:238103 | 39/239 (16%) | ||
SPEC | 5061..5288 | CDD:238103 | 39/247 (16%) | ||
Smc | 5131..6031 | CDD:224117 | 183/980 (19%) | ||
SPEC | 5926..6140 | CDD:238103 | 55/218 (25%) | ||
SPEC | 6144..6354 | CDD:238103 | 48/225 (21%) | ||
SPEC | 6583..6791 | CDD:238103 | 56/211 (27%) | ||
KASH | <6880..6909 | CDD:402255 | 16/28 (57%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D46at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |