DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msp300 and wu:fi04e12

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:XP_021324396.1 Gene:wu:fi04e12 / 327364 ZFINID:ZDB-GENE-030131-5575 Length:2207 Species:Danio rerio


Alignment Length:2427 Identity:476/2427 - (19%)
Similarity:848/2427 - (34%) Gaps:815/2427 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly 11209 QRILEVNEGLKDLDVAIKNGDKTVIQTTVITVIEKVSTWLETIE-YRVYLIRQNSNEGPSEEKLD 11272
            ||:..|...|||:   :|..|...:....:|..|..|:..|.:: |:..|:...|:   .|:|.|
Zfish   247 QRLDSVKSLLKDM---MKAEDVVKVYEARLTEKETASSDPEEVQRYQKVLLSMRSD---LEQKQD 305

  Fly 11273 NYNQLNDELSTIKQNVVQLERQLSKAEPEPQLLQCVDSLKEHVDAVEQVTQQNQVQDSNDLDKWH 11337
            ..|.|..:|:.:::  |..:|...:       .||:.:|.::.|.|.|::           |:|.
Zfish   306 LLNSLVVDLNQMQK--VNDQRDQGR-------YQCIINLTQYADHVHQLS-----------DRWK 350

  Fly 11338 NFEVLLYNVSSVLADLQQSYDLLINQEYPLSAKLA-QLDE----LEQQHEAAQQQLA---HLCQN 11394
            ...|   .:::.|.|| .||...:.:....|::|: .:||    ::.||....:..|   .|...
Zfish   351 RIHV---QINNRLVDL-DSYLPQLKRYMQSSSQLSGWIDETQKQIDSQHSVKMEDSAAYTQLLNQ 411

  Fly 11395 ARAFQRDFPGKK-MPQDVHNAFETSKNIANNIQAE----------------RERVLQ--LQSLAE 11440
            .:|...|...|: :.:.||...||..:...|.:.|                :..|||  ..|:||
Zfish   412 QKALNSDIKAKRELMETVHKDGETCISAIKNYELELATYSAGLETLLNIPIKRTVLQSPSSSIAE 476

  Fly 11441 E-------YEQTL---KEFTKITVLADKLVES--------PIVSSSLEQLNNEVQKQR------- 11480
            |       |.:.|   .::.|:.:.:.|.:|.        .::...||||.:.::.|.       
Zfish   477 EVSSLNAHYLELLTRSSDYYKLLLASQKNMEELKIRNTRIELLEEELEQLRDAIKDQTANNASLQ 541

  Fly 11481 ----KFFVNLSHCRAMLESLE--------------ENIDSETREKHSELHKELYNRATSLLDKAS 11527
                ::...|::.::.|.|||              |::|| ::::..||.:|:......|.|  .
Zfish   542 DALLQYQQELNNSQSHLLSLEEVKRTETMKCMATQESLDS-SKDRLEELTEEVRRLKLQLED--M 603

  Fly 11528 ERSSKLVQAASRWTVL----EKGMRDELQWLQVAQQRVPDLSAVTSADYDQYTTLYQSLSNDISH 11588
            ||..|:|:  .|:|.|    ::.||.:|:.|:.|.                              
Zfish   604 ERKKKIVE--ERYTFLQEEHDETMRKKLKELEQAS------------------------------ 636

  Fly 11589 HYVKMTQLSGIANKLQLLVQAPNLVEETNEALIVLLKLREEVALYLHRLLVFKEIWVQYEQQTDK 11653
             :.||              :....|.|.|..   |.:||:|:                 |.:..:
Zfish   637 -WAKM--------------ELEKTVSERNRE---LERLRKEL-----------------EDEARR 666

  Fly 11654 LEAFVREAEQELRNIQIPSQPTHQPIEHMRQFWEIKARFELHNNVRTDTGLSFEKSLQVIPLADE 11718
                ::||:.||..::         .||..:..|:|..:|                 ..|.:|..
Zfish   667 ----IKEAQTELAKVR---------QEHSTEIREVKQTYE-----------------SQILVAQS 701

  Fly 11719 MLQRQFHAQLEDRWQAVAQAIELIQHNIVECLSSEDVPADEKLKMVERELQEIYLTMTSMKGVIK 11783
            .:|:....:..|   :.|.::|.      |.|..|.....|:||.:     .|.|:....:..|.
Zfish   702 SMQKLSQEKESD---SAAMSLEF------ERLEGESSELKEQLKRL-----RISLSQEEAQRRIL 752

  Fly 11784 NEEELCLYIERVQVLRTRVGFIGNELGRIGLQEPAIEPEKVGELFSLSHKISTQIAEELEGASVL 11848
            .||     ::|:..|.|.                  |..|..||.|   :|...::::.||.:.:
Zfish   753 EEE-----VKRLTALNTE------------------ESRKRHELES---QIQVMMSQKREGDNKM 791

  Fly 11849 RDQLQAIQEGISNQRKHQAKISVILDECEAAERQGADVLEKAVADCQAAGEELVISWQEIMRIRQ 11913
            |:    :||  |:.|..|.||:.|                          ..|..:::|..|:::
Zfish   792 RE----VQE--SSSRTLQDKINEI--------------------------NRLTRNFEEERRLKR 824

  Fly 11914 MLHTLPMRLKMSVSPVKLERDISQLQDDHAFLESK--CTNIMAI-LRSRLAVWLRYERQLELVH- 11974
                            .||.|..:|:.|.|.|:||  .||...: |||.       .|:|.|:. 
Zfish   825 ----------------SLETDKRRLEGDLAVLKSKNETTNEELVQLRSS-------HRELSLIRV 866

  Fly 11975 ---------GSVQETDFMMELIRVHGQVDYERLRKATERLEGLAGDLHNREQLIDELKGAAKPLI 12030
                     |..::|     :.|:..     |:::..|.|:.|.|:|..:.|:.:|..|..:   
Zfish   867 ELEAHALEKGRSEQT-----IARLQA-----RIQELQEELKRLEGELEKQRQVAEEEAGKRR--- 918

  Fly 12031 ESCDVQIVEQIESAVQEAVVAWNDTSENLQQLRTRYQRAVELWDKYRNASAAVKNSIDQQMDAVK 12095
                     :.||.::::..|..:.:..:..|||. |....:..|:.:             :..|
Zfish   919 ---------RTESQLEKSSQAMREYTTTITTLRTS-QEETNIGAKHAD-------------EKCK 960

  Fly 12096 SLEQPLDALQHAKVCQDNLTTQNDRILELRDIVAKIAADVGLDASALMQGE---------LDALG 12151
            .|::.||....    ::.:|:||         :|.:.|::......|.|.:         .:||.
Zfish   961 QLQEALDRASK----ENKVTSQN---------LAALKAEINTLKLQLTQEQGRVQDSNQRYEALH 1012

  Fly 12152 QRLAECKDAITT-------LANVAETQDKERKELDKEVTLAKAYFNNVQQDISREAPQNPKESEE 12209
            :.:.|...|:..       |..:.||..|:|:.:::|:...:.    ..:::.:...:..:|..|
Zfish  1013 RSMEEKSCALNVSSGETERLQRLTETLTKDRQRVEEELRAVRL----EHEELLKNKKRGDREMTE 1073

  Fly 12210 QLAALRAHLQTLART----EEQLRQL---------------KERHQNSEV-------APSVASSD 12248
            |:.||:..|.:..|.    :..:|||               |:..:.|.|       ..|::...
Zfish  1074 QITALQKQLDSSQRAGAEHDRLMRQLSREREKLQVEIENVQKQARETSSVIQTSQSQCSSLSQER 1138

  Fly 12249 DDGILEVLALWQKIFQDTFQEYHRLSTRLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDYSSLR 12313
            ||.:.::..:.|:|.:     ..||...|||.:.|.|:...::..||...:    .|.:|::..:
Zfish  1139 DDLLKKITTMEQEIVR-----LKRLEDELARIKLSLESELRFKSQLQEENN----KIKKDFTQWK 1194

  Fly 12314 EQQQLCAIHQNLLISQQSVLSETPLESELSEQYKALTNLHNETLSRIMQRNGELERRVSGWNAYR 12378
            .:   ||.|:..|  :|.....:.|||:.|..                  ..||||       .|
Zfish  1195 TK---CASHEEQL--RQHASERSGLESQFSSV------------------RTELER-------LR 1229

  Fly 12379 QQLAALLDWLRQREAERNALQLRYIHLKRVPHLKHRLDAMIQQLDQGEQQSKALQEQQQELARHC 12443
            .||         ||||.                ::||  ::|..:|...:.:||::.:|||    
Zfish  1230 TQL---------REAEE----------------RYRL--LLQNFEQERTEMQALRDSKQEL---- 1263

  Fly 12444 DDALATAMRMEQASIG----QRISNLRAALKTWQGFLQRVTQLSESYEQRVNQLQQEFGAAQKLL 12504
                   :|::|...|    .:......:...::|..:.:|.          |..|:.|...|::
Zfish  1264 -------LRLQQKPDGATKYTQTDQTDPSSLVFEGVRKNITA----------QQLQDCGVIDKVI 1311

  Fly 12505 DANSESLPTQPAAIEQLLGSLRAQRVQLGAQVSALES-----LTVTQEELKECISPHDMKTIRQR 12564
               .|.|.|....::.:...:|......|| ::.|.:     :|.|:.:.:..||.      :..
Zfish  1312 ---FEQLMTGKRTVQDVSVDIRLNLKGTGA-IAGLAAGPKGKMTFTEAKKQNLISD------KSG 1366

  Fly 12565 NWLLWQQHAD---LDYQLANLINSIEERLSLLSNYQIRYDRISQWLQRLEQRVEKDADVTAMTNP 12626
            |.||..|.|.   :|.| ||...::||  :.|:.                  |..:||...:...
Zfish  1367 NMLLEAQAATGYIIDPQ-ANTKMTVEE--ACLNG------------------VVDEADKKQLLIA 1410

  Fly 12627 EQAAKQLEQQVNSELQLRDKEREWLLSTSRELLTLYSEPEVRSQVQQQSDSLIDRWQRLKYLAKQ 12691
            |.|.          :..||.:...||..|                |.....:|||...|:.|..|
Zfish  1411 EAAC----------VGFRDPKTAKLLPVS----------------QAMKKGIIDRETTLRLLQAQ 1449

  Fly 12692 KATKIGELKMTL-LRLEERIALIRAWLFEVESQLDKPLNFESYTPNVIEAKLKEHEQIQRSIEHH 12755
            :|.. |.|...| :.|.:..|:.|..   |:..|.:.||.:.      :..:.....::.|....
Zfish  1450 EAAG-GILDPILSVYLPKDTAMDRDL---VDEDLYQALNAKP------DCYIDPDTDLRASYVTL 1504

  Fly 12756 SSNVGEVLNLVEMLLN------DADSWRTQVNTSGLAASAQNLEQ------RWKNVCSQSAERKA 12808
            .......||...:||.      .....|::||.|.| ..|:.||.      |...:.||..|.:.
Zfish  1505 KKQCKADLNTGLLLLPAPEKPITVQGLRSEVNVSDL-VDAKLLEPSDMNHLREGKITSQEIEHRL 1568

  Fly 12809 R--------ILTIWNLLQQ-LIKLTAEHKNWLGKQ-------ESQIA-GFERDQKSHSKHKLEER 12856
            |        |..|::...: .:.:....||.|.:.       |:|.| ||..|..::..:.:||.
Zfish  1569 RAYLRGSTCIAGIYDEAGECTLPIYQAMKNGLLRPGTTLELLEAQAASGFVIDPINNEYYTVEEA 1633

  Fly 12857 ------QMELRAKLEELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKVMVSMW----RQ 12911
                  .:|.:.||               :.|:.|::...||        .|..::|::    |.
Zfish  1634 CQKGLVGVEFKDKL---------------LSAEKAVTGYKEP--------GTNKLISLFEAIERG 1675

  Fly 12912 LTPRCHA--LLDA---------------IDKDAKLMREFNNAQLEATNSLNAIQKALEQLPSAEN 12959
            |..:.|.  ||:|               ||.|....|.:             ..:.:.|:...|.
Zfish  1676 LIEKGHGIRLLEAQIASGGIIDPKHSHRIDVDVAYQRGY-------------FDQGMNQILKDEG 1727

  Fly 12960 QQTSKAEPKAVLQRLESLEKKLQDAQQHVQQADNLAQEAKTRTKQQPQLKQLLELVSAYTTLWQT 13024
            ..|                |...|....    |||.               .|||.|..|.   .
Zfish  1728 DDT----------------KGFFDPNTE----DNLT---------------YLELKSRCTI---D 1754

  Fly 13025 VQTRIVTLKTTWLTRAAQAAAS-----LPVSEAANAAVQVNTLSQRK---------LRQAQQMQR 13075
            .:|.:|.|......:|.|..::     |.|...:|..:.|....::|         |.|.:....
Zfish  1755 KKTGLVLLPIHDKKKAQQKNSTRKRRVLIVDPDSNKEMTVREAYEKKLIDYETFLELSQQECEWE 1819

  Fly 13076 ETSITAKD----AYIMELQTAITECQNNLDEL------QRTVVDKTRKPGPQ---------KIAK 13121
            ||:|||.|    ..||::||.|   |.||.||      .:.|.:|.|..|..         |..|
Zfish  1820 ETTITAPDGSTSTAIMDMQTGI---QYNLKELLAQGVIDQDVFNKYRSGGISVTELAGMITKKTK 1881

  Fly 13122 LLGN--AQSSTELVKHLSHLLLTECKADDQAAEVDTVAELTLRFDTLQSQWKARQQHDQNASEVG 13184
            :|.|  :.||:..:...|....::.....|..:.:|:..:....:.|| |.::.....::.|.:.
Zfish  1882 MLTNPVSSSSSSSLSSSSSSFTSQTTTKSQIVKTETIKSIESTSEYLQ-QDQSSANSSKHISSMS 1945

  Fly 13185 RLTCPLCTQRNWQQIDN--------DLWRLEQWLQFAESTQKAQSAPPSNIELLEDVTQDHREFL 13241
            ....||.     :.|:.        |..:||: :...::.::.         :::.:|...   |
Zfish  1946 VKLSPLV-----ESIEEQNPVGAIFDTEKLEK-ITVCDALKRG---------MIDSITAQR---L 1992

  Fly 13242 LDLESHKSIISS--------------LNVVGDHLATHTLDTEKA---------RQLRSRLEADNE 13283
            |:.::....|.|              :.|:.|.:|......:||         ::..|..||..|
Zfish  1993 LEAQACTGGIVSPDNGRRMSIQEATRVGVLDDEMANRIKPAQKAYIGFEDVKTKRKMSAAEAVKE 2057

  Fly 13284 RWNNVCINATKWQGLLQTALMGNSEFHQTIG---ELVEWLQRTEQNIKASE--------PVDLTE 13337
            :|    :.....|..|:...:....|...:|   .|.|.||....:::|::        |..||.
Zfish  2058 KW----LPYEAGQRFLEFQYLTGGLFDPELGCRRSLEEALQMGWLDMRAAQRLQDTRHHPKTLTC 2118

  Fly 13338 ERSVLETKFKKFKDLRAELERC 13359
            .::.|...:|:      .:|.|
Zfish  2119 PKTKLRISYKE------AMEAC 2134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705 178/886 (20%)
SMC_prok_B 11614..12442 CDD:274008 172/882 (20%)
SPEC 11994..12156 CDD:295325 30/170 (18%)
SPEC 12374..12564 CDD:295325 36/198 (18%)
Lipase_chap 12376..12529 CDD:281297 29/156 (19%)
SPEC 12703..12923 CDD:238103 54/276 (20%)
SPEC 12816..13032 CDD:295325 45/251 (18%)
SPEC 13196..13374 CDD:238103 35/206 (17%)
KASH 13484..13540 CDD:287506
wu:fi04e12XP_021324396.1 SMC_N <178..912 CDD:330553 182/899 (20%)
SMC_N 575..>1269 CDD:330553 196/1018 (19%)
Plectin 1369..1408 CDD:307019 14/59 (24%)
PLEC 1405..1441 CDD:197605 11/61 (18%)
Plectin 1444..1483 CDD:307019 11/42 (26%)
Plectin 1571..1610 CDD:332473 5/38 (13%)
Plectin 1609..1648 CDD:307019 11/53 (21%)
PLEC 1646..1682 CDD:197605 10/58 (17%)
Plectin 1684..1723 CDD:307019 8/51 (16%)
Plectin <1783..1812 CDD:307019 4/28 (14%)
Plectin 1958..1993 CDD:307019 4/47 (9%)
Plectin 1991..2030 CDD:307019 7/41 (17%)
Plectin 2067..2107 CDD:307019 8/39 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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