DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Msp300 and Dsp

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:XP_225259.4 Gene:Dsp / 306871 RGDID:1305794 Length:2877 Species:Rattus norvegicus


Alignment Length:2636 Identity:491/2636 - (18%)
Similarity:898/2636 - (34%) Gaps:886/2636 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly 11208 EQRILEVNEGLKDLDVAI---------KNGDKTVIQTTVITVIEKVST-----WLETIEYRVYLI 11258
            ::|:|::.|.::.|..||         ..|..|....:......|..|     |:......:.|:
  Rat   148 QKRLLQLQEQMRALYKAISAPRVRRASSKGGYTCQSGSGWDEFTKRLTGECLGWMRQQRAEMDLM 212

  Fly 11259 RQNSNEGPSEEKLDNYNQLNDELSTIKQNVVQLERQLSKAEPEPQLLQCVDSLK----EHVDAVE 11319
            ....:.|..|:.::::..:::.:...:..:.:::..|.:.....||.:..::|.    |.:|.:.
  Rat   213 AWGVDSGSVEQHINSHRSIHNAIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLR 277

  Fly 11320 QVTQQNQVQDSNDLDKWHN---FEVLLYNVS------------------------SVLADLQQSY 11357
            |:  ||.:|.::....|.|   .|.|||:.|                        ..|..|:|..
  Rat   278 QL--QNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQES 340

  Fly 11358 DLLINQEYPLSAKL-AQLDELEQQHEAAQQQL----AHLCQNARAFQ---------------RDF 11402
            |.|:..::|.|.|: |.:|.|:.|.....|..    .||.:||..||               :|.
  Rat   341 DQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDS 405

  Fly 11403 PGKKMPQDVHNAFETSKNIANNIQAERERVLQLQSLAEEYEQTLKEFTKITVLADKLVESPIVSS 11467
            ..||.|.|        ||            :.||.|.|:.::..||       .:|::|..    
  Rat   406 IRKKYPCD--------KN------------MPLQHLLEQIKELEKE-------REKILEYK---- 439

  Fly 11468 SLEQLNNEVQKQRKFFVNLSHCRAMLESLEENIDSETREKHSELHKEL-------YNRATSLLDK 11525
              .|:.|.|.|.:|.                 :..:.|......:|.:       |.:...::.|
  Rat   440 --RQVQNLVNKSKKI-----------------VQLKPRNPDYRSNKPIILRALCDYKQDQKIVHK 485

  Fly 11526 ASERSSKLVQAASRWTVLEKGMRDELQWLQVAQQRVPDLSAV----------TSADYDQY----- 11575
            ..|...|.....|:|.|...|..|.|         ||.:..:          .|...:||     
  Rat   486 GDECILKDNNERSKWYVTGPGGVDML---------VPSVGLIIPPPNPLAVDLSCKIEQYYEAIL 541

  Fly 11576 ---TTLYQSLSNDISHHYVKMTQLSGIANKLQLLVQAPNLVEETNEALIVLLKL--REEVALYLH 11635
               ..||.::.:.:|.||..:.                  :|:.....|..||.  :|:....:.
  Rat   542 ALWNQLYINMKSLVSWHYCMID------------------IEKIRAMTIAKLKTMRQEDYMKTIE 588

  Fly 11636 RLLVFKEIWVQYEQQTD--------KLEAFVREAEQELRN--IQIPSQPTHQ-----PIEHM--- 11682
            .|.:..:.:::..|.::        ::::...:|::..:.  ||:|..|.||     .|.|:   
  Rat   589 DLELHYQDFIKNSQGSEMFGDDDKRRMQSQFTDAQKHYQTLVIQLPGHPQHQTVTKTEITHVGTC 653

  Fly 11683 ------------------------------RQFWEIKARFELHNNVRTDTGLSFEKSLQVIPLAD 11717
                                          ||....:||..|.|.:.||.|.:...::::..|  
  Rat   654 QDVNHNKVIETNRENDKQETWLLMELQKIRRQMEHCEARMTLKNLLLTDQGSTHNITVKINEL-- 716

  Fly 11718 EMLQRQFHAQLEDRWQAVAQAIELIQHNIVECLSSEDVPADEKLKMVERELQEIYLTMTSMKGV- 11781
                    ..:::..||:|:.:..::..:.....|      ||...::.|:..::..:.::.|| 
  Rat   717 --------KSVQNDSQALAEVLNQLKDMLANFRGS------EKYCYLQNEIFGLFQKLENINGVT 767

  Fly 11782 ------------------------------IKNEEELCLYIERVQVLRTRVGFIGNEL------- 11809
                                          :..||.:||.:::|:..|..:..|.|:|       
  Rat   768 DGYLNSLCSVRALLQAILQTEDMLKVYEARLTEEETVCLDLDKVEAYRCGLKKIKNDLNLKKSLL 832

  Fly 11810 --------------GRIGLQEPAIE------PEKVGELFSLSHKISTQI---------------- 11838
                          .:...|.|..:      .|||.:|.....||..||                
  Rat   833 ATMKTELQKAQQIHSQSSQQYPLYDLDLGKFTEKVTQLTDRWQKIDKQIDFRLWDLEKQIKQLRN 897

  Fly 11839 --------AEELEGASVLRDQLQAIQEG------------------ISNQRKHQAKISVILDECE 11877
                    .:.|..|...:|.|::::.|                  ||.:|....::..|.:.|.
  Rat   898 YRDNYQSFCKWLYDAKRRQDSLESMKFGDSNTVMRFLNEQKNLHNEISGKRDKSEEVHKIAELCA 962

  Fly 11878 ----------AAERQGAD------------------VLEKAVADCQAAGEELVISWQEIMR-IRQ 11913
                      |:...|.:                  :|::| ||..|...||:....:..| :.:
  Rat   963 NSIKDYELQLASYTSGLETLLNIPIKRTMVQSPSGVILQEA-ADIHARYIELLTRSGDYYRFLSE 1026

  Fly 11914 MLHTL-PMRLKMSVSPV-----KLERDI-SQLQDDHAFL-------ESKCTNIMAILRSRLAVWL 11964
            ||.:| .::||.:...|     :|.||. |:..:.:.||       :::|:.    .:::|....
  Rat  1027 MLKSLEDLKLKNTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAECSQ----FKAKLVSLE 1087

  Fly 11965 RYERQLEL-----------VHGSVQETDFMMELIRVHGQVDYERLRKAT--ERLEGLAGDLHNRE 12016
            ..:||.||           .:|.::|.:  .::.|:..:::.|:.|:.|  :|.:....|     
  Rat  1088 ELKRQAELDGKSAKQNLDKCYGQIKELN--EKITRLTYEIEDEKRRRKTVEDRFDQQKND----- 1145

  Fly 12017 QLIDELKGAAKPLIESCDVQIVEQIESAVQEAVVAWNDTSENLQQLRTRYQRAVELWDKYRNASA 12081
              .|:|:.|.:...||...|.:|. |.|::|       ....:::||...|.......:|.|..|
  Rat  1146 --YDQLQKARQCEKESLGWQKLES-EKAIKE-------KEYEIERLRVLLQEEGARKREYENELA 1200

  Fly 12082 AVKNSIDQQMDAVKSLEQPLDALQHAKVCQDNLTTQNDRILELRDIVAKIAADVGLDASALMQGE 12146
            .|:|..:::|                    .||..:.:..:.:.....|..:....|.|..::.:
  Rat  1201 KVRNHYNEEM--------------------SNLRNKYETEINITKTTIKEISMQKEDDSKNLRNQ 1245

  Fly 12147 LDALGQRLAECKDAITTLANVAETQDKERKELDKEVTLAKAYFNNVQQDISREAPQNPKESEEQL 12211
            ||.|.:...:.||.|..|.:......::|:..::.....||..:.:.|.                
  Rat  1246 LDRLSRENRDLKDEIVRLNDSILQATEQRRRAEENALQQKACGSEIMQK---------------- 1294

  Fly 12212 AALRAHLQT-LARTEEQLRQLKERHQNSEVAPSVASSDDDGILEVLALWQKIFQDTFQEYHRLST 12275
               :.||:. |.:..:|..:...||:.|              ||..|   |..||..:|..||  
  Rat  1295 ---KQHLEVELKQVIQQRSEDNARHKQS--------------LEEAA---KTIQDKNKEIERL-- 1337

  Fly 12276 RLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLES 12340
               :::...||.|.| :| ::..|.:..:..|:..|||.:                      .|:
  Rat  1338 ---KAEYQEEAKRRW-EY-ENELSKVRNSYDEEIISLRNK----------------------FET 1375

  Fly 12341 ELSEQYKALTNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAE----RNALQLR 12401
            |:           |.|.:.|.|...:.|...||   ||.|:..|....|....|    :|.|...
  Rat  1376 EI-----------NITKTTIHQLTMQKEEDTSG---YRAQIDNLTRENRSLSEEVKRLKNTLAQT 1426

  Fly 12402 YIHLKRVPHLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLR 12466
            ..:|:||.      :.:.||...|.:.|:..|:.:.||                    :::|.:|
  Rat  1427 TENLRRVE------ENVQQQKASGSEMSQRKQQLEIEL--------------------RQVSQMR 1465

  Fly 12467 AALKTWQGFLQRVTQLSESYEQRVNQLQQEFGAAQKLLDANSESLPTQPAAIEQLLGSLRAQRVQ 12531
                         |:.|..|:|.::.      ||:.:.|.|.|                      
  Rat  1466 -------------TEESMRYKQSLDD------AAKTIQDKNKE---------------------- 1489

  Fly 12532 LGAQVSALESLTVTQEELKECISPHDMKTIRQRNWLLWQQHADLDYQLANLINSIEERLSL---- 12592
                :..|:.|...:...::|:...:.|.          |....|.|.||  ||..|.:|.    
  Rat  1490 ----IERLKQLVDKETNERKCLEDENSKL----------QRVQYDLQKAN--NSATEAMSKLKVQ 1538

  Fly 12593 ---LSNYQIRYDRISQWLQRLEQRVEKDADVTAMTNPEQAAKQLEQQVNSELQLRDKEREWLLST 12654
               |:..:|.|:|:||      :|..||.|:|.:           |....:|||:.::.|..||.
  Rat  1539 EQELTRLRIDYERVSQ------ERTVKDQDITRI-----------QSSLKDLQLQKQKAEEELSR 1586

  Fly 12655 SRELLTLYSEPEVRSQVQQQSDSLIDRWQRLKYLAKQKATKIGELKMTLLRLEERIALIRAWLFE 12719
            .:.  |...|...|..::::.::       ::...|::|.||..|..   :||:...:.:....:
  Rat  1587 LKR--TASDESSKRKMLEEELEA-------MRRSLKEQAVKITNLTQ---QLEQASIVKKRSEDD 1639

  Fly 12720 VESQLDKPLNFESYTPNVIEAKLKEHEQIQRSIEHHSSNVGEVLNLVEMLLNDADSWRTQVNTSG 12784
            :..|.|           |::..::|.::.|..:..        |:|      |.::.|.|     
  Rat  1640 LRQQRD-----------VLDGHVREKQRTQEELRR--------LSL------DVEALRRQ----- 1674

  Fly 12785 LAASAQNLEQ-RWKNVCSQSA-ERKARILTIWNL----LQQLIK-LTAEHKNWLGKQESQIAGFE 12842
            |....:|::| ..:|...|.| |.|:|.|....:    ||.|.: ||.||.              
  Rat  1675 LVQEQENVKQAHLRNEHFQKAIEDKSRSLNESKIEIERLQSLTENLTKEHL-------------- 1725

  Fly 12843 RDQKSHSKHKLEERQMELRAKLEELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKVMVS 12907
                     .|||....||.:.::|               :...|.....:|.....|.:::.:|
  Rat  1726 ---------MLEEELRNLRLEYDDL---------------RRGRSEADNDKNSTISELRSQLQIS 1766

  Fly 12908 MWRQLTPRCHALLDAIDKDAKLMREFNNAQLEATNSLNAIQKALEQLPSAENQ-QTSKAEPKAVL 12971
            ..|.|               :|....|:.|.|..|....|:|..:|...|.|: |.||::...|:
  Rat  1767 NNRTL---------------ELQGLINDLQRERENLRQEIEKFQKQALEASNRIQESKSQCTQVV 1816

  Fly 12972 QRLESLEKKLQDAQQ---HVQQADNLAQEAKTRTKQQPQLKQLLELVSAYTTLWQTVQTRIVTLK 13033
            |..|||..|::..:|   .:|:.::....||...:.:.::||.||...      |.:|..:...|
  Rat  1817 QERESLLVKIKVLEQDKARLQRLEDELNRAKATLEAETRVKQRLECEK------QQIQNDLNQWK 1875

  Fly 13034 TTWLTRAAQAAASLPV-------------SEAANAAVQVNTLSQRKLRQAQQMQRETSITAKDAY 13085
            |.: :|..:....:..             ||......::..:.:|..|:.:...|||.       
  Rat  1876 TQY-SRKEETIRKIESEREKSEREKNSLRSEIERLQAEIKRIEERCRRKLEDSTRETQ------- 1932

  Fly 13086 IMELQTAITECQNNLDELQRTVVDKTRKPGPQ-----KIAKLLGNAQSSTELVKHLSHLLLTECK 13145
             .:|:|.....|..:|:|::......|:...:     ..:||:.:.     |.|.::.:.|.||:
  Rat  1933 -SQLETERCRLQKEIDKLRQRPYGSHRETQTEYEWTVDSSKLVFDG-----LRKKVTAMQLYECQ 1991

  Fly 13146 ADDQAAEVDTVAELTLRFDTLQSQWKARQQHDQNASEV-----------GRLTCPLCTQRNWQQI 13199
            ..|:.              ||....|.::..::.|||:           |....|          
  Rat  1992 LIDKT--------------TLDKLLKGKKSVEEVASEIQPFLRGAGAIAGASASP---------- 2032

  Fly 13200 DNDLWRLEQWLQFAESTQKAQSAPPSNIELLE------DVTQDHR-----------EFLLDLESH 13247
                   ::.....|:.:|....|.|.:.|||      .:...||           ..|:|.:..
  Rat  2033 -------KEKYSLVEAKRKKFITPESTVMLLEAQAATGGIIDPHRNEKLTVDNAIARDLIDFDDR 2090

  Fly 13248 KSIISSLNVV---GDHLATHTLDTEKARQLRSRLEADNERWNNVCINATKWQGLLQTALMG---- 13305
            :.|.::...:   .|..:..|:...:|  ::..|           |:......||:..|..    
  Rat  2091 QQIYTAEKAITGFDDPFSGKTVSVSEA--IKKNL-----------IDRETGMRLLEAQLASGGVV 2142

  Fly 13306 ---NSEFHQTIGELVEWLQRTEQNIKASEPVDLTEERSVLETKFKK---FKDLRAELERC--EPR 13362
               ||.|......|...|...:.....::|.|  .:::.::...||   :..||   |||  ||.
  Rat  2143 DPVNSVFLPKDVALARGLIDRDLYRSLNDPRD--SQKNFVDPITKKKVSYMQLR---ERCRIEPH 2202

  Fly 13363 V--------------------VSLQDAADQ-LLRSVEGSEQQS-QHTYERTLSRLTDLRLRLQSL 13405
            .                    |::.:..|. :||....:|.:| |.:|:....|:.|.   ||..
  Rat  2203 TGLLLLSVQKRSMSFQGIRQPVTVTELVDSGILRPSTVNELESGQISYDEVGERIKDF---LQGS 2264

  Fly 13406 RRLSGIYIVKLGAVLG-YEGDNLGVPLHMLSSELLD 13440
            ..::|||.......|| ||...:|:.....:.|||:
  Rat  2265 SCIAGIYNETTKQKLGIYEAMKIGLVRPGTALELLE 2300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705 191/1095 (17%)
SMC_prok_B 11614..12442 CDD:274008 188/1038 (18%)
SPEC 11994..12156 CDD:295325 32/163 (20%)
SPEC 12374..12564 CDD:295325 33/193 (17%)
Lipase_chap 12376..12529 CDD:281297 29/156 (19%)
SPEC 12703..12923 CDD:238103 41/226 (18%)
SPEC 12816..13032 CDD:295325 48/224 (21%)
SPEC 13196..13374 CDD:238103 38/230 (17%)
KASH 13484..13540 CDD:287506
DspXP_225259.4 SPEC 197..373 CDD:295325 34/177 (19%)
SPEC 292..457 CDD:238103 46/214 (21%)
Cast 1032..1681 CDD:287183 174/910 (19%)
DUF2570 <1276..>1349 CDD:305162 22/113 (19%)
GBP_C <1318..1412 CDD:303769 34/153 (22%)
coiled coil 1382..1393 CDD:293879 2/10 (20%)
coiled coil 1402..1412 CDD:293879 2/9 (22%)
End3 <1514..1662 CDD:289527 42/199 (21%)
Taxilin 1524..1839 CDD:286771 94/428 (22%)
Plectin 2055..2093 CDD:279071 7/37 (19%)
PLEC 2091..2128 CDD:197605 6/49 (12%)
Plectin 2130..2171 CDD:279071 8/40 (20%)
Plectin 2260..2300 CDD:279071 12/42 (29%)
Plectin 2298..2338 CDD:279071 2/3 (67%)
PLEC 2335..2371 CDD:197605
Plectin 2373..2414 CDD:279071
Plectin <2475..2505 CDD:279071
PLEC 2618..2654 CDD:197605
Plectin 2656..2695 CDD:279071
Plectin 2732..2773 CDD:279071
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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