DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Msp300 and Evpl

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:NP_001100536.1 Gene:Evpl / 303687 RGDID:1306141 Length:2029 Species:Rattus norvegicus


Alignment Length:2441 Identity:465/2441 - (19%)
Similarity:828/2441 - (33%) Gaps:779/2441 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly 11383 AAQQQLAHLCQ----NARAFQRDFPGKKMPQDVHNAFETSKNIANNIQAERERVLQLQSLAEEYE 11443
            ||.|:||.|..    ||...:||.            .||.|    .:|.:|:...|.|:|..:.|
  Rat    34 AATQELALLISRMQANADQVERDI------------LETQK----KLQQDRQNGAQNQALQHQQE 82

  Fly 11444 --QTLKEFTKITVLADKLVESPIVSSSLEQLNNEVQKQRKFFVNLSHCRAMLESLEENIDSETRE 11506
              :.|||       |:.|         |:.|..:|.|.|:    |.|.:|  |.:|::|      
  Rat    83 TGRNLKE-------AEVL---------LKDLFLDVDKARR----LKHPQA--EEIEKDI------ 119

  Fly 11507 KHSELHKELYNRATSLLDKASERSSKLVQAASRWTVLEKGMRDELQWLQVAQQRVPDLSAVTSAD 11571
                  |:|:.|.|   .:.:|     .:|.....||...:...:.|.:|.:|:...:..     
  Rat   120 ------KQLHERVT---QECAE-----YRALYEKIVLPPDVGPRVDWTRVLEQKQKLICE----- 165

  Fly 11572 YDQYTTLYQSLSNDISHHYVKMTQLSGIANKLQLLVQAP--NLVEETNEALIVLLKLREEV--AL 11632
             ..|......|...::.|.:...::.....:|:.|| .|  |.:......|:.....|.:.  :|
  Rat   166 -GHYGPGMAELEQQVAEHNILQREIEAYGQQLRTLV-GPDANAIRNQYRDLLKAASWRRQSLGSL 228

  Fly 11633 YLHRLLVFKEIWVQYEQQTDKLEAFVREAEQELRNIQIPSQPTHQPIEHMRQFWEIKARFELHNN 11697
            |.|.....|::....:||.       |..:|:..::........:..||.:|. |:.|:.:..|.
  Rat   229 YTHLQGCTKQLGALADQQG-------RILQQDWSDLMPDPAGVRREYEHFKQH-ELLAQEQSINQ 285

  Fly 11698 VRTDTGLSFEKSLQVI-PLADEMLQRQFHAQLEDRWQAVAQAIELIQHNIVE-CLSSEDVPADEK 11760
            :..|.....|.....| |:                 ||..:|:::...|.:. |:..|     .:
  Rat   286 LEDDAERMVELGHPAIGPI-----------------QAHQEALKMEWQNFLNLCICQE-----SQ 328

  Fly 11761 LKMVE--RELQEIYLTMTSMKGVIKNEEELCLYIERVQVLRTRVGFIGNELGRIGLQEPAIEPEK 11823
            |:.||  |..||                                                 |.:.
  Rat   329 LQHVEDYRRFQE-------------------------------------------------EADS 344

  Fly 11824 VGE-LFSLSHKISTQIAEELEGASVLRDQLQAIQEGISNQRKHQAKISVILDECEAAERQGADVL 11887
            ..: |..||..:.|:.:.....:||...:|                    |.:.||.|:|.| :.
  Rat   345 ASQTLAKLSSNLDTKYSFGAGDSSVSPTEL--------------------LLQLEAEEKQLA-IA 388

  Fly 11888 EKAVADCQAAGEEL------------------VISWQ--EIMRIRQMLHTLPMRLKMSVSP---- 11928
            |:.:.:.|...:|:                  :..|.  |:..:|...:|    ||.:..|    
  Rat   389 ERTIGELQRRSQEVAPLPQRRNPPKQPLHVDSICDWDSGEVQLLRGERYT----LKDNADPYTWV 449

  Fly 11929 --------------------------VKLERDISQLQDDHAFLESKCTNIMAILRSRLAVWLRYE 11967
                                      .|..|..|:||.    |:.|.:...:.|::..|..|:..
  Rat   450 VQGPGGETKSAPAACLCIPAPDPEAVAKASRLASELQT----LKQKLSTEKSRLKNASAEHLQQG 510

  Fly 11968 RQLELVHGSVQETDFMMELIRVHGQVDYERLRKATERLEGLAGDLHNREQLIDELKGAAKPLIES 12032
            :|...  ||........:|:....|:|               |||...|:.:  |..|..||.:|
  Rat   511 QQAPA--GSAPADPQAQKLLSQMTQLD---------------GDLGQVERQV--LSWARSPLNDS 556

  Fly 12033 CDVQIVEQIESAVQEAVVAWNDTSENLQQLRTRYQRAVELWDKYRNASAAVKNSIDQQMDAVKSL 12097
            ..   ::.:|..:|..    ..|:::||.|                  .|.|.:..|:.:|..|.
  Rat   557 SP---LKDLEGRIQSC----EGTAQHLQNL------------------GAEKEAAQQECEAFLST 596

  Fly 12098 EQPLDALQHAKVCQDNLTTQNDRILELRDIVA-KIAADVGL-----DASALMQGELDALGQR--L 12154
            :....|.....|..:|:..:...:..|..:.. |..|.:||     :|..::||....|.|.  :
  Rat   597 KPTGSAALQLPVVLNNVKNKYSDVHSLCYLYGEKAKAALGLEKQIQEADGIIQGFEATLAQEGPI 661

  Fly 12155 AECKDAITTLANVAETQDKERKELDKEVTLAKAYFNNVQQD-----ISREAPQNPKESEEQLAAL 12214
            .|...|:.  ..|:|.| ::||||             :||.     :.|:.    |.:|....||
  Rat   662 PEGSGALQ--ERVSELQ-RQRKEL-------------LQQQACVLGLHRQL----KAAEHACGAL 706

  Fly 12215 RAHL----QTLARTEEQLRQLKERHQNSEVAPSVASSDDDGILEVLALWQKIFQD---TFQE--- 12269
            :.:.    |.|.|.:.|:|.|.:|:.:              :.:.|.|.:||.||   |.|:   
  Rat   707 QNNFQEFCQDLPRQQRQVRALTDRYHS--------------VGDQLDLREKILQDASLTHQQLKN 757

  Fly 12270 -------------YHRLSTR--------------------LARSQNSSEALRLWRQYLQHVQSFL 12301
                         :||:...                    |.|.|:.:...||.|...:.:|.: 
  Rat   758 SRDNLSSWLEQLPHHRVQPSDGPSQIAYKLQAQKRLIQEILGREQDQATVARLTRDLQEALQEY- 821

  Fly 12302 SCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKALTNLHNETLSRIMQRNGE 12366
                     .||.....|::...|.:|....|....|:..:..|.|.||..:.|..:...|:..:
  Rat   822 ---------ELRADTYRCSLEPTLAVSAPKRLRVISLKENIQAQEKNLTKAYTEVAAAEQQQLHQ 877

  Fly 12367 LE---------------------RRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVPH 12410
            ||                     |:.||..|:.:..:.:|.  .|.|.||          |||..
  Rat   878 LEFAKKMLEKKELNEDFQAIHSARQGSGSPAHTKTESEVLK--TQLEEER----------KRVAE 930

  Fly 12411 LKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDD------ALATAMRMEQASIGQRISNLRAAL 12469
            ::..|:...|||.|...|....:.:::|:.....|      .|..:.|:|:.  |:|.:.|:|.|
  Rat   931 VQRELEERRQQLLQLRTQQPVARLEEKEVVEFYRDPQLKSNVLQASSRLEEE--GKRRARLQAEL 993

  Fly 12470 KTWQGFLQRVTQLSESYE--------QRVNQLQQEFGAAQKLLDANSESLPTQPAAIEQLLGSLR 12526
            :.   ..|:|..|....:        :.|.|::::.|            |.:|...:...:..||
  Rat   994 EV---VAQKVVHLEGKRKAMQPHLLTKEVTQIERDPG------------LDSQVTQLHNEMQGLR 1043

  Fly 12527 AQRVQLGAQVSAL--ESLTVTQEELKECISPHDMKTIRQRNWLLWQQHADLDYQLANLINSIEER 12589
            .:...|.|::..|  |.||:.|:|:                                   :::|:
  Rat  1044 GENAVLAARLEGLKDELLTLEQKEI-----------------------------------NVKEK 1073

  Fly 12590 LSLLSNYQIRYD-RISQWLQRLEQRVEKDA-----DVTAMTNPEQAAKQLEQQVNS--------E 12640
            :.:....::..| .:.:..|.|..::|:||     ...|:...:...|.|||.::|        |
  Rat  1074 VVVKEVVKVEKDLEMVKAAQTLRLQIEEDAARRKGAKEAVAKTQARIKDLEQAISSVEPKVIVKE 1138

  Fly 12641 LQLRDKEREWLLSTSRELLTLYSEPEVRSQVQQQSDSLIDRWQRLKYLAKQK-----ATKIGELK 12700
            ::..:::...|...||....|..|......:.::...|.|:::.::   |||     ..::.|:.
  Rat  1139 VKKVEQDPGLLKEASRLRSLLEEEKNKNVMLARELQELQDKYRAVE---KQKPKVQLQERVSEIF 1200

  Fly 12701 MTLLRLEERIALIRAWLFE-------VESQLDKPL-------------NFESYTPNVIEAKLKEH 12745
            ......|:.|..:||.|.|       ||.:::|.|             .::..|..|:  :.:::
  Rat  1201 QVHPETEQEILRLRAQLQETGSKKSCVEREVEKLLPELEVLRAQKPVVEYKEVTQEVV--RHEKN 1263

  Fly 12746 EQIQRSIEHHSSNVGEVLN--------LVEMLLNDADSW---RTQVNTS-------------GLA 12786
            .::.|.|:...:.:.|::|        |:. |..:.|.|   |::|.|.             .|.
  Rat  1264 PEVLREIDRLKAQLNELVNTHGRCQEQLIR-LQGERDEWKRERSKVETKMVNKEVVRHEKDPVLE 1327

  Fly 12787 ASAQNLEQRWKNVCSQSAERKARILTIWNLLQQLIKLTAEHKNWLGKQESQIAGFE-----RDQK 12846
            ..|:.|.|..:....   :|:|....::.|..:.:.|...      :.|.||...|     :|.|
  Rat  1328 KEAERLRQEVREAVQ---KRRAAEDAVYELQNKYLLLERR------RPEEQIVVQEVVVTQKDPK 1383

  Fly 12847 SHSKH-----KLEE-----RQMELR-----AKLEELES-------QSVNL---RQLEQIYAKLAM 12886
            .|.:|     .|:|     ||:||.     |.:||.|:       :|..|   |:|.|:..|:..
  Rat  1384 LHEEHSRLSRSLDEEVGRRRQLELEVRQLSASVEEEEAMLSFEEDRSKKLAAERELRQLTLKIQE 1448

  Fly 12887 SAGVEPENIQKLTLPTKVMVSMWRQLTPRCHALLDAIDKD----AKLMREFNNAQLEATNSLNAI 12947
            .....|...:|:.:...|.:.....|.....||...:|::    .:|.||....|:|    ::.:
  Rat  1449 LEKRPPALQEKIIMEEVVKLEKDPDLERSTEALRRELDQEKNRVIELHRECKGLQVE----VDLL 1509

  Fly 12948 QKALEQLPSAENQQTSKAEPKAVLQRLESLEKKLQDAQQHVQQADNLAQEAKTRTKQQPQLKQLL 13012
            ||             :|::.|.:.:.:..:||......:..:..:.|.:|...|..::..::.|.
  Rat  1510 QK-------------TKSQEKTIYKEVIRVEKDPVLESERARVWETLNRERAARQSREEDVRSLK 1561

  Fly 13013 ELVSAYTTLWQTVQTRIVTLKTTWLTRAAQAAASLPVSEAANAAVQVNTLSQRKLRQAQQMQRET 13077
            |.:.           |...|:.:|..:.|:..||   .:......::..|.|:||::|||:|.|.
  Rat  1562 ERID-----------RAEALRRSWSLQKARDQAS---QDCGRLQRELRELEQQKLQKAQQLQEEG 1612

  Fly 13078 SITA------------KDAYIMELQTAITECQNNLDELQRTVVD--------------KTRKPG- 13115
            .:.:            :...:.:|:.||...::.:.|.:||:.|              :||:.. 
  Rat  1613 RLLSQKTESERQKAAQRSQALSQLEAAILHEKDKIYEKERTLRDLHTKVSREELNQETQTRETNL 1677

  Fly 13116 PQKIAKL---LGNAQSSTE-----LVKHLSHLLLTECKAD-DQAAEVDTVAELTLRFDTLQSQWK 13171
            ..||..|   .||..|..|     ::....:|.|.|.:.| ::........|.::..|.     |
  Rat  1678 STKICILEPETGNDMSPYEAYKRGIIDRGQYLQLQELECDWEEVTTSSPCGEESVLLDR-----K 1737

  Fly 13172 ARQQHDQNASEVGRLTCPLCTQRNWQQI-DNDLWRLEQWLQFAESTQKAQS-------------- 13221
            :.:|:...|:    |.|...::..:.:. |..|...|..|..|..|:.:.|              
  Rat  1738 SGKQYSIEAA----LRCRRISKEEYHRYKDGRLPISEFALLVAGETKPSSSLSIGSIISKSPVCS 1798

  Fly 13222 ---------APPSNIELLEDVTQDHREFLLDLESHKSIISSLNVVGDHLATHTLDTEKARQLRSR 13277
                     :|..::.|.||                    |..:.|.:                 
  Rat  1799 PGPQSTGFFSPGLSLGLTED--------------------SFPIAGVY----------------- 1826

  Fly 13278 LEADNERWNNVCINATKWQGLLQTALMGNS--EFHQTIGELVEWLQRTEQNIKASEPVDLTEERS 13340
               |....|...|.|...:.:|. .:.|..  |.....|.:|:.|.|...::..:....|.|..|
  Rat  1827 ---DTTTDNKCSIKAAVAKNMLD-PITGQKLLEAQAATGGIVDLLSRERYSVHKAVEQGLIENTS 1887

  Fly 13341 VLETKFKKFKDLRAELERCEPRVVSLQDAADQLLRSVEGSEQQSQHTYERTLSRLTDLRLRLQSL 13405
            .            ..|...:.....::|...:...||..:.|:.....|..|..|.        :
  Rat  1888 T------------QRLLNAQKAFTGIEDPVTRKRLSVGEAIQKGWMPQESVLPHLL--------V 1932

  Fly 13406 RRLSGIYI---------VKLGAVLGYEGDNLGVPLHMLSS---ELLDNTTLSTSSMQAAAPNTEN 13458
            :.|:|..|         |....:.|...::||..|...||   :|.|..|....|.:.|......
  Rat  1933 QHLTGGLIDPKRTGRIPVPQAVLCGMISEDLGQLLQDESSYEKDLTDPITKERLSYKEAMGRCHK 1997

  Fly 13459 ANNTDGGDAVDGDVINTTVLARGARFLGRVARASLP 13494
                   |.:.|.::...:| .|.|.. |||..:||
  Rat  1998 -------DPLSGLLLLPAML-EGYRCY-RVASPTLP 2024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705 126/689 (18%)
SMC_prok_B 11614..12442 CDD:274008 179/961 (19%)
SPEC 11994..12156 CDD:295325 34/169 (20%)
SPEC 12374..12564 CDD:295325 43/205 (21%)
Lipase_chap 12376..12529 CDD:281297 35/166 (21%)
SPEC 12703..12923 CDD:238103 61/293 (21%)
SPEC 12816..13032 CDD:295325 50/249 (20%)
SPEC 13196..13374 CDD:238103 29/203 (14%)
KASH 13484..13540 CDD:287506 5/11 (45%)
EvplNP_001100536.1 SPEC 228..>358 CDD:295325 34/208 (16%)
SMC_prok_B <473..1221 CDD:274008 181/906 (20%)
Smc 953..>1685 CDD:224117 157/829 (19%)
Plectin <1683..1713 CDD:279071 7/29 (24%)
PLEC 1813..1850 CDD:197605 10/77 (13%)
Plectin 1852..1893 CDD:279071 9/52 (17%)
PLEC 1889..1926 CDD:197605 6/36 (17%)
Plectin 1932..1969 CDD:279071 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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