DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msp300 and GAS2

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:NP_001378862.1 Gene:GAS2 / 2620 HGNCID:4167 Length:331 Species:Homo sapiens


Alignment Length:170 Identity:36/170 - (21%)
Similarity:56/170 - (32%) Gaps:57/170 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  3886 EWIDNTVTHIKTAVTPLPDVKEPIKKDKKPQKPKKQKATKK-PTPVALPEDEVSSEPSEEIVVEC 3949
            |.:||.....:.|.|    ::|..|:.....||.|....|| |...:.|.....:.         
Human    59 EKLDNGALLCQLAET----MQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFAR--------- 110

  Fly  3950 EVEEKETKSIKNTENAFSWASLVKKPGEWVDDIASRKKPVEIIHEEPKE---------------- 3998
                      .||.|..||.   :..|  ||:....:....::|::|:|                
Human   111 ----------DNTANFLSWC---RDLG--VDETCLFESEGLVLHKQPREVCLCLLELGRIAARYG 160

  Fly  3999 VHP----------RKERKISKPQPKPQSENTTKRNNKKET 4028
            |.|          .:|..:|.|.|.|..  ::|.:.||.|
Human   161 VEPPGLIKLEKEIEQEETLSAPSPSPSP--SSKSSGKKST 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705
SMC_prok_B 11614..12442 CDD:274008
SPEC 11994..12156 CDD:295325
SPEC 12374..12564 CDD:295325
Lipase_chap 12376..12529 CDD:281297
SPEC 12703..12923 CDD:238103
SPEC 12816..13032 CDD:295325
SPEC 13196..13374 CDD:238103
KASH 13484..13540 CDD:287506
GAS2NP_001378862.1 CH_GAS2 29..163 CDD:409116 26/131 (20%)
GAS2 200..291 CDD:413356
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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