DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Msp300 and Gas2l2

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:NP_001013781.1 Gene:Gas2l2 / 237891 MGIID:3652048 Length:860 Species:Mus musculus


Alignment Length:897 Identity:173/897 - (19%)
Similarity:283/897 - (31%) Gaps:269/897 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 RHQHHHAKTGKKLHAPRPERRGRSPRRRPPQQQKPVESSQQP---------SIEIQLERQQPQEQ 604
            ||.:...:......|..|||..:.|.   ||.......:.||         |..||..|::...|
Mouse    67 RHANTVTEAALAFLAEAPERAQKIPM---PQAGVFCNGAAQPGTFQARDNISNFIQWCRKEMGIQ 128

  Fly   605 EQLFLPADDRTRSRSPMWVPGSTSYAEVLRGLELERIRAEQ--QAAQAVQGRSDLTIQDVVDASA 667
            |.|....:|....::...|        ||..|||.| ||.:  .||.|:     :.:::.:|  .
Mouse   129 EVLMFETEDLVLRKNVKSV--------VLCLLELGR-RAWRFGVAAPAL-----VHLEEEID--E 177

  Fly   668 EVAGSIYIPQPDPEPPIKETQQP-----QPPQLEQYITETSTLLDYSTTQQQEQK---------- 717
            |:...:.:|.|||.|||...::|     ....::..::..:..:.:|..:..|.|          
Mouse   178 ELRRDLALPSPDPPPPIPPARRPCHFHNLDQMVQSLVSHCTCPVQFSMVKISEGKYRVGDSNTLI 242

  Fly   718 -----------------------------------------------PPINYEVPMTAEEIAATY 735
                                                           ||:.:||     ::....
Mouse   243 FIRILRSHVMVRVGGGWDTLGHYLDKHDPCRCTSLSHKPGSFLKPPGPPVQHEV-----KVQDGP 302

  Fly   736 LQPDPQLYQTMYENVADSGQWGFVTGSTTD--PQQQQAPQNYYE-----------QIMQMQQYPI 787
            .||.|.:..:..::......|...|.|:..  |....:|....|           .:.:.|:.|.
Mouse   303 SQPQPTMTISRSQSPLPPVDWKTYTSSSRKLRPPTPSSPGLRSEPPVRARTLREDPLPRSQEKPT 367

  Fly   788 QYQQVAVPPAATTQYQLLAGYYQPVAQTEAYSTV-------YPAEPNQIYYAPQATEYSQEFSQQ 845
            ..|:::.|..     |..:....|..|    ||:       .|.||      |:..         
Mouse   368 PSQRMSSPGP-----QFSSTCRGPDLQ----STLSGKRANRCPGEP------PRGR--------- 408

  Fly   846 QEQQVEPMLEYQQEAVEQ-TYLLDPYRAESTLPSTTGNSVLDR------VVTTLAS-----IVQQ 898
                 .|.|...:||..: |:...|......:|..|......|      ..::|||     ::.|
Mouse   409 -----TPTLWVHKEAGSRGTHTKAPTPQRLQIPEATSKRTSARGPSPPPRSSSLASPHMIWVLHQ 468

  Fly   899 SAEPLTTSTQQIEPLATVVQSEP----YYIEEHVQMLRPVEP------QELELDEPRPDI----- 948
            .|.|     |..||: ||..|.|    ..|...:...||..|      .|.|....|..|     
Mouse   469 GASP-----QLSEPM-TVHSSSPGKGLTKIPIRLSPARPPTPGRSSLGTEGEYSTGRGSISSRAL 527

  Fly   949 -------TFGQFEVDAIETIPLDEPQAPQTEVETTESQVRTQQTITTTTYVTETSNVS--EQTQP 1004
                   |.|...|:|        ....||:::|| |:....:::.|..:....::::  .:.:.
Mouse   528 EGNLDRSTHGHHSVEA--------SGDHQTDIQTT-SETEDPRSLGTQKWKERHTSLALGRRREQ 583

  Fly  1005 TVIMQQTQEVIAIPDTPEIPTEEPTNVVVHPKPQRRSNQQVRPQDISTGSTYAEVLFGLHHKEHP 1069
            .:.....:||:|.....|:.|              ...|..|.|.|.....|...|.|    ..|
Mouse   584 ALYDNLKEEVVANMKLLEVGT--------------AYTQGTRSQAIPRSGVYVPSLGG----RWP 630

  Fly  1070 VFQPSSQQPTPVR--LTSSPPLQRKTEQAGPISNTAFTSKTTQPGRQVEKSTTWEHKNDNVDSRN 1132
              :|.......:|  :...|||.:...:|..:.:.........||...||..:.|.......|.|
Mouse   631 --EPGGPYDKVIRELVQGPPPLLKVDLKAWKVGSECLPRPIVDPGSPKEKLGSRETGTRIKASLN 693

  Fly  1133 SRSKRVRH---------EAQPEPLPIKQSTR---------------KDGRTVRKPQSADTNGIAS 1173
            :....||.         ...|....::..||               |..||:||||.     |.|
Mouse   694 AEDTTVRTVSPARGQGCSTPPVSANLEAPTRSCSDPSSDKASVCLGKGKRTLRKPQK-----IPS 753

  Fly  1174 V-ETKVVVDTPAPSVVVEETSKPEPKPRKSKKSKKTTTDNVVESA-----VDISVPSKKDTQSVL 1232
            : :.|:     .|.:......:||.:|.:..|....:...:..:|     :..::..|......:
Mouse   754 IYKLKL-----RPRIRPRRDHRPEKRPSRIPKPLPYSCLVLARTAPGSRLLKATLGGKGGVPCQV 813

  Fly  1233 PSVGKKETVVEKSVIKKTVEPSVEPVEPVPVPSKREKKHKPVKEKETPQSDE 1284
            ...||||...:|.....::|.|::|.|          ..:|:|...||.|.|
Mouse   814 NGTGKKEEEKKKGGSNISLESSIQPAE----------SQEPLKLGGTPLSPE 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705
SMC_prok_B 11614..12442 CDD:274008
SPEC 11994..12156 CDD:295325
SPEC 12374..12564 CDD:295325
Lipase_chap 12376..12529 CDD:281297
SPEC 12703..12923 CDD:238103
SPEC 12816..13032 CDD:295325
SPEC 13196..13374 CDD:238103
KASH 13484..13540 CDD:287506
Gas2l2NP_001013781.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
CH 34..159 CDD:237981 27/103 (26%)
GAS2 207..274 CDD:280367 3/66 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..459 36/211 (17%)
Interaction with ADORA2A and GNAS. /evidence=ECO:0000269|PubMed:23994616 431..860 97/480 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 473..574 25/110 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 697..743 6/45 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 758..781 5/27 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 801..860 16/65 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.