Sequence 1: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011534876.1 | Gene: | SYNE2 / 23224 | HGNCID: | 17084 | Length: | 6936 | Species: | Homo sapiens |
Alignment Length: | 7606 | Identity: | 1432/7606 - (18%) |
---|---|---|---|
Similarity: | 2691/7606 - (35%) | Gaps: | 2106/7606 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 7222 EPVVEVTTVVEEVKPETQPEPTPVSEV-------APSQPLSWSSIVSQTTEVTTNVTETR----- 7274
Fly 7275 --------FTEEPE--DKKPLEEKPKKQKPKK-----EKKTKVVEAPEPIVESAVPEDVVEPTVE 7324
Fly 7325 --VTFVEEPVVEVTTVVQEVK--PETQPEPTPVSEVAPSQPLSWSSIVSQTTEVTTNVTET---- 7381
Fly 7382 -----------RFTEEPED-------KKPLEEKPKKQKPKKEK-----------KTKVVEA-PEP 7416
Fly 7417 I---------VESAVPEDVVEPTVEVTFVEEPVVEVTTVVEEVTPETQPEPTSVSEVAPSQPLLW 7472
Fly 7473 SSIVSQTTEDVAEALITDVAEDQKPL-MEKPKKLKAGKEKKSKVQNVEES----ILESDVPLSVV 7532
Fly 7533 EPIIGFTTVQKDVPPKTESHTFSWSSIVAQSVE-VPRTIPKHVESKTGGIQNFIAQEQNYSTVVN 7596
Fly 7597 DSVKKPKPKKEKKIVQPIQQPTGESVPVRKDHM---------REGV--TKAVPEPQTLSWSSIVS 7650
Fly 7651 HNIDLTPTFTENRVIEAVDEI--------NPDDSSSNQEGELPIHV----------------DER 7691
Fly 7692 KRK-----------PKKDKKRDQ-------NIETSVVYEEIPETERVAVSSTPEFSIQLPAPTKP 7738
Fly 7739 SVWSSSDTYAEVVKKSGYNNNTNIKYQKIEAREPIKSEPKHTFVEVQTHEDLLEFPDPIIPAIER 7803
Fly 7804 DEALEKPSQLSWKDLVDEDDVDPLESWHKGETDSVEIKTQKPIQERHSRVSVKPEIQITEVVTET 7868
Fly 7869 QSQSETDQEFLEITSKKRNRSRSRS-QQSQASNIDEKHQKKKSKKPKNTVPKAPAQQPTEAPEDV 7932
Fly 7933 QPP-------KESVPSVE------------EPSPPPAPSPNTSGMSWAAIAAHNVPEPVQHIRPL 7978
Fly 7979 QAEAKPTVVEDVRKSTNEHTVNIPITFETTEPKTKKPKQK-----SKRKLPTDVVDF---INAEK 8035
Fly 8036 SI------------HQVIASKP----------EIVEEPGSIIVEDVNNTLTSWEIKTPLAPFEFV 8078
Fly 8079 AESEVEPVSESHMEDLPVEKVLKTEPIVESTAVDESKTTTTVTTTTTTTETTSNVSIPEEP--KK 8141
Fly 8142 VVEP--EKKPEEPKKPAYAGL--PVDDSS-----------------NSWMDVLDEPM-------- 8177
Fly 8178 -NFSDDEEEPVP---------EPLKEETLVEEVVEEKPIVEVSV---VDDSKSITTVTTTTTTTE 8229
Fly 8230 TISELPIP--------EEPKKVVEPEKK-------PEEP-KKPAYAGL-------------PVDE 8265
Fly 8266 SSSSWMDV---LDEPMNFSDDEEEPVPEPVKEETLVEEVVE--------EKPIVEVSVVDDSKSI 8319
Fly 8320 TTVTTTTTTTETISKLPISEEPKKVVEPEKKPEEPKKPAYAGLPVDDSS--NSWMDVLDEPMNFS 8382
Fly 8383 DDEEEPVPEPVKEETLV----------------EEVVEEKPIVEVSVVDDSKSITTVTTTTTTTE 8431
Fly 8432 TISELPIPEEPKKVVEPEKKP-----------EEPKKPAYAGLPVDDSSNS-------------- 8471
Fly 8472 --------W-----------------MDVLDEPMNFSD------DEEEPV---------PEPVKE 8496
Fly 8497 ETLVEEVVEEKPIVEVSVVDDSKSI-TTVTTTTTTTETISELPIPEEPKKVVEPEKKPEEPKKPA 8560
Fly 8561 YAGL---------------PVDESSSSWMDVLDEPMNFSDDEEEPVPEPLKEETVVEE------- 8603
Fly 8604 --------VVEKKPI-VEVSVVDDS---------KTIT--------------------TVTTTTT 8630
Fly 8631 TTETISELPIPEEP-------EKVEQAVV------------------KVEEPKKPAYAGLP--VD 8668
Fly 8669 ASSSSWMD-----VLDEPMNFSD-------SEEEPVPESQT------EVTPLAPF--------KD 8707
Fly 8708 VAVDKVQKPVE----TANIS-----IDSGNTEAEKTP---LAPFEEIPDS-----PLDDA----- 8750
Fly 8751 --FICETSYWSATLKPGQKPASTVETTETKQEESQPI--------KVTIPDDEGIDEVAVKSPTD 8805
Fly 8806 QPTTWSAI------VQTETTVFPTPDVQKDNEKTPD---WSTHV-----VSKTTDFQEP-----K 8851
Fly 8852 PLKNVV------DSENITTTTTTYVTTTVTTHKDTSIVENESPATSYVSTVVTSHKNELDLEPEP 8910
Fly 8911 FELTKPD---NLIE-NLNREA--------------FKVHPQY----EFLQGQYQQLK-----VVN 8948
Fly 8949 ITKEP-YLEEPKEDVPLVEDYVIIE-PEAIPEINSEILALNLY---------------------- 8989
Fly 8990 ---LDQTNILPK--------TRIDVD--TISQLLTLQKS---SDPIVEKETVQGETKSVE----- 9033
Fly 9034 ------------------ILVKKSIVE---------------SPIEPIADEPLVIETSQSPPEPS 9065
Fly 9066 KLLWNLSQDNFLKLINHYKQTAGDAFALLPRTTTDTTIAQETQDDKQKTDGITETVVTTTTTTIT 9130
Fly 9131 DRV--VEK--TEPDASSLPIIPTAQP-----------------LTAPTLGNLDQLRLNL------ 9168
Fly 9169 ---YLDDWQ------PASVDAHLADDLFDGLKRVDVAGSEAELDKDK------NQEQQPDGDAK- 9217
Fly 9218 KPDGVTGIPDKDDHDSDDDD---DDDDDDDDEGGKPTVPEIRKPNDDD-----------DKPND- 9267
Fly 9268 ---------------KDP--GSGSSGNVTPTPEHDA-QYG----------QNRSCSSEYRSTDLP 9304
Fly 9305 GGVGH----WRDDSTYLALEAEQPQVKLESV--PLAPTISGVESVLTETNTTSPAPAPDPVTAPE 9363
Fly 9364 TSPSTTTSSLNVANALIQLASATTHTLSAKANAAATATHAAALAATSALLPVATAVVDKLTTTTT 9428
Fly 9429 -AAAETPAATSDVAAVNPYVARATPAATTVAEAATAAAAEIPPAATHTETTTTSSSSGEVVALPT 9492
Fly 9493 ENTGAVRRTTTTTTTVTTT---TTVETPSTTSNTTTTTTTTSSNELQEQRQKDLITQELDELLQS 9554
Fly 9555 LSSVEDGIANMNQSSLDGMLHGLKLIQSNLEVHERDAIE--LKNQAKKLPTDPATERLLNDTVDR 9617
Fly 9618 IDLLLRRTQQGITMIANAMHGQKKR-QQEIDEYQQHLLELEQWIIEVSAELASFEPTSDSSTDEQ 9681
Fly 9682 VLKSQVERSQQLLRTLKDRQQSMEDLVEQTRQLQS-------HPDVSPLADTLMEQLQSIITILR 9739
Fly 9740 EQVTVATKRIFTIEK------------RIVDLRKAKSEEAQRQRVLADSLIKPPTEAPASPEAHE 9792
Fly 9793 SIES-----------------NEN-TIDSSSMPEE-----------------------EIKP--- 9813
Fly 9814 ----------TGVYVETQTSLSLQQPPVQVVTTTTVEAQTSFKEPAVE---------TAEVALQT 9859
Fly 9860 QKERSPTENIMVTQTVHHGQE-TIQIDTT---RNKDVPDEPEDVQIEARYHQRPKGDVDRATELI 9920
Fly 9921 LKNVPQAFETTFVEPDETTTEVIV--------GPDGTKHIVLKKVTRTRQQVVQQQQISSIETIS 9977
Fly 9978 DSDGNIEVHSTGQINLENVHTTDTKADPEEGSVHTVITQQTRGAVVDSTQPEGVILQEFETEPTI 10042
Fly 10043 ETY------EEVI---------APGSQAQLIPMQPGDV-----QTQGTIRAVVQQVTRKVIRKTR 10087
Fly 10088 KIIK----RVVIIDG------KEHITEE---VVEEPEEVEITEEETAPHINVNIVRTVDGKVVSE 10139
Fly 10140 EEFQRMMQEPGVLIE-------EVATDLQKPTAEPQQEVFD--------IESTQVTTT---TRTT 10186
Fly 10187 TATTQEQEQPEQQTQPTTTETT--KEAPVELPAPQVDVEQPVVVATTSPVHVPTADVVEPKDSSP 10249
Fly 10250 TSTTA----AVVDVEAVVEDINEIWPLEHHLKPTNIDFSQHVEEL---------AAPAAVTAET- 10300
Fly 10301 EASMPVEEIWPTSPETGNSLTLEQYEFEPQSPHEESTKSDLVKPQETEPQVVAETKPEGITTGSI 10365
Fly 10366 TITKTTTTITSSTEVPEETLVQNVPADE---QQPPANKIKTDIQSFLEAEQTLAAALKEQSSTPT 10427
Fly 10428 GASVAEDVQTQPEEIVLEERTVEI--STIKTEENQQ-----------------EPVIVEEVKSLP 10473
Fly 10474 VEPEPVEPELEEVAIAIVEQTEEKPEEPVIEKQPASGPIDLRAATQLFISGEAAAS--------T 10530
Fly 10531 APQKTFQISAPSLEDNGAGVLKVVLGKESTNEEDTAAPTTGKVSMTIIETAAAPAADAKRRRKKK 10595
Fly 10596 KRRDTKHEEELEQEQETEPEPVAAVKEPEVSSDVPVSPEDSPRDTVRHESIVEISPDSDLSSIEI 10660
Fly 10661 DTKVKIVEDAVVSSPSESPRTPMVELVIPTEVVELALVEDEEQQTTPRIPSPTEKSEVEQDIKSV 10725
Fly 10726 QTSPQHQPKLDETAVQTSLEVQPDNQENESQTL--------IVEITETEAQTTPRSEEQSVAVEI 10782
Fly 10783 STTEIQTDVSGQPAETVEISSQTTVTTT---IEKELQTTPKDSPRAPEAGSSDVVESLVQDLVKD 10844
Fly 10845 MTTDLPVRTSEQSTVTETTTTTETHVQTTTPEPREQTEVIKPETAHEE----TSTVELVQFADGE 10905
Fly 10906 MQTTPPGDQQPASLDDSSLTATSISVSE-------PYELEVKTTVAIPADS-DTSVA----EPTV 10958
Fly 10959 Y----EYTQTMQLPKQEKKSKKDKKKKQKNVPEVEQQLPEDQQISVTVEIAPELLSE------SG 11013
Fly 11014 IVVSTNQQIEDVPHVTPVV-------------DTPIESE----EVETPKA--QRVQLQITKTTVY 11059
Fly 11060 DEYPDL--------------PVHITEQNKVLIASQQSKRSGAGPTSSAVTIEEVGSPTEE----- 11105
Fly 11106 -------LVVPITPGPDNLSGEPHNIWFSATTSVDKTPIELSQALIMSESLQHYPGQQKLTQEPI 11163
Fly 11164 LISTKEAIGDRIKQLKQASPQQATP--------LSNVL----------HLATLSEQIKELPTEQR 11210
Fly 11211 ILEVNEGLKDLDVAIKNGDKTVIQTTVITVIEKVSTWLETIEYRVYLIRQNSNEGPSEEKLDNYN 11275
Fly 11276 QLNDELSTIKQNVVQLERQLSKAEPEP-----QLLQCVDSLK---EHVDAVEQVTQQNQVQDSND 11332
Fly 11333 LDKWHNFEV--LLYNVSSVLADLQQSYDLLINQEYPLSAKLAQLDELEQQHEAAQQQLAHLCQNA 11395
Fly 11396 RAFQRDFPGKKMPQDVHNAFETSKNIANNIQAERERVLQLQS--LAEEYE----QTLKEFTKITV 11454
Fly 11455 LADKLVESPI-VSSSLEQLNNEVQKQRKFFVNL--------SHCRAMLESLEENIDSETREKHSE 11510
Fly 11511 LHKELYNRATSLLDKASERSSKLVQAASRWTVLEKGMRDELQWLQVAQQRVPDLSAV--TSADYD 11573
Fly 11574 QYTTLYQSLSNDISHHYVKMTQLSGIANKLQLLVQAPNLVEETNEALIVLLKLREEVALYLHRLL 11638
Fly 11639 VFKEIWVQYEQQTDKLEAFVREAEQELRNIQIPSQPTHQPIEHMR----QFWEIKARFELHNNVR 11699
Fly 11700 TDTGLSFEKSLQVIPLADEMLQRQFHAQLEDRWQAVAQAIELIQHNIVECLSSEDVPADEK---- 11760
Fly 11761 ---LKMVERELQE---IY--LTMTSMKGVIKNEEELCLYIERVQVLRTRVGFIGN---ELGRIGL 11814
Fly 11815 QEPAIE----PEKVGELFSLSHKIS--------------TQIAEELEGASVLRDQLQAIQEGISN 11861
Fly 11862 QRKHQAKISVILDECEAAERQGADVLEKAVADCQAAGEELVISWQEIMRIRQMLHTLPMRLKMSV 11926
Fly 11927 SPVKLERD----ISQLQDDHAFLESKCTNIMAILRSRLAVWLRYERQLELVHGSVQETDFMMELI 11987
Fly 11988 RVHGQ---VDYERLRKATERLEGLAGDLHNRE---QLIDELKGAAKPLIESCDVQIVEQIESAVQ 12046
Fly 12047 EAVVAWNDTSENLQQLRTRYQRAVELWDKYRNASAAVKNSIDQQ-----------MDAVKSLEQP 12100
Fly 12101 LDALQHAKVCQDNLTTQNDRILELRDIVAKIAADVGLDASALMQGELDALGQRLAECKDAITTLA 12165
Fly 12166 NVAETQDKERKELDKEVTLAKAYFNNVQQDISR---EAPQNPKESEEQLAALRAHLQTLARTEEQ 12227
Fly 12228 LRQLKERHQNSEVAPSVASSDDDGILEVLALWQKIFQDTFQEYHRLSTRLARSQNSSEALRL--- 12289
Fly 12290 -------WRQYLQHVQSFLSCAIPEDYSSLREQQQL-------CAIHQNL---LISQQ-SVLSET 12336
Fly 12337 PLES--ELSEQYKALTNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQ--------R 12391
Fly 12392 EAERNAL-QLR-YIH-LK-RVPHLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMR 12452
Fly 12453 MEQASIGQRISNLRAALKTWQGFLQRVTQLSESYEQRVNQLQQ------EFGAAQKLLDANSES- 12510
Fly 12511 LPTQPAAIEQLLGSLRAQRVQLGAQVSALESLTVTQEELKECISPHDMKTIRQRNWLLWQQHADL 12575
Fly 12576 DYQLANLINSIEERLSLLSNYQIRYDRISQWLQRLEQRVEKDADVTAMTNPEQAAKQLEQQVNSE 12640
Fly 12641 LQLRDKEREWLLSTSRELLTLYSEPEVRSQVQQQSDSLIDRWQRLKYLAKQKATKIGELKMTLLR 12705
Fly 12706 LEERIALIRAWLFEVESQLDKPLNFESYTPNVIEAKLKEHEQIQRSIEHHSSNVGEVLNLVEMLL 12770
Fly 12771 NDADSWRTQVNTSGLAASAQNLEQRWKNVCSQSAERKARILTIWNLLQQLIKLTAEHKNWLGKQE 12835
Fly 12836 SQIAGFERDQKSHSKHKLEERQMELRAKLEELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTL 12900
Fly 12901 PTKVMV----SMWRQLTPRCHALL----------------------------------------D 12921
Fly 12922 AIDKDAKLMREFNNAQLEATNSLNAIQKALEQLPSAENQQTSKAEP-KAVLQRLESLEKKLQDAQ 12985
Fly 12986 QHVQQA-DNLAQEAKTRTKQQPQLKQLLELVSAYTTLW--QTVQTRIVTLKTTWLTRAAQAAASL 13047
Fly 13048 PVS-----------EAANAAVQVNT----------------------------LSQRKLRQ---- 13069
Fly 13070 -----AQQMQRETSITAKDAYIMELQTAITECQNNLDELQRTVVDKTRKPGPQKIAKLLGNAQSS 13129
Fly 13130 TELVKHLSHLLLTECKADDQAAEVDTV------------AELTLRFDTLQSQWKARQQHDQNA-- 13180
Fly 13181 ----SEVGRLTCPLCTQRNWQQIDNDLWRLEQWLQ--FAESTQKAQSAPPSNIELLEDVTQDHRE 13239
Fly 13240 FLLDLESHKSIISSLNVVGDHLATHTLDTE--KARQLRSRLEADNERWNNVCINATKWQGLLQTA 13302
Fly 13303 LM---GN-----------SEFHQTIGELVEWL---QRTEQNIKASEPVDLTEERSVLETKFKKFK 13350
Fly 13351 DLRAELERCEPRVVSLQDAADQLLRSVEGSE----QQSQHTYERTLSRLTDLRLRL-QSLRRLSG 13410
Fly 13411 IYIVKLGAVLGYEGDNLGVPLHMLSSELLDNTTLSTSSMQAAAPNTENANNTDGGDAVDGDVINT 13475
Fly 13476 TVLARGARFLGRVARASLPIQALMLLLLGVATLVPHG-EDYTCMFSNTFARSLEPMLSYPHGPPP 13539
Fly 13540 T 13540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
SPEC | 9546..9732 | CDD:295325 | 41/195 (21%) | ||
sbcc | 11187..12008 | CDD:129705 | 171/909 (19%) | ||
SMC_prok_B | 11614..12442 | CDD:274008 | 174/923 (19%) | ||
SPEC | 11994..12156 | CDD:295325 | 39/175 (22%) | ||
SPEC | 12374..12564 | CDD:295325 | 42/208 (20%) | ||
Lipase_chap | 12376..12529 | CDD:281297 | 36/171 (21%) | ||
SPEC | 12703..12923 | CDD:238103 | 60/263 (23%) | ||
SPEC | 12816..13032 | CDD:295325 | 55/263 (21%) | ||
SPEC | 13196..13374 | CDD:238103 | 50/198 (25%) | ||
KASH | 13484..13540 | CDD:287506 | 33/56 (59%) | ||
SYNE2 | XP_011534876.1 | CH | 33..135 | CDD:237981 | |
CH | 182..281 | CDD:278723 | 23/111 (21%) | ||
PRK03918 | <1418..2014 | CDD:235175 | 102/614 (17%) | ||
SPEC | 1840..2031 | CDD:295325 | 34/194 (18%) | ||
PRK03918 | <1868..>2369 | CDD:235175 | 82/505 (16%) | ||
SbcC | 2877..>3417 | CDD:223496 | 126/669 (19%) | ||
SbcC | <3298..3912 | CDD:223496 | 129/764 (17%) | ||
SPEC | 3690..3880 | CDD:295325 | 40/212 (19%) | ||
SPEC | 4945..5169 | CDD:238103 | 36/228 (16%) | ||
SPEC | 5063..5276 | CDD:238103 | 38/237 (16%) | ||
SPEC | 5178..5384 | CDD:295325 | 48/235 (20%) | ||
SPEC | 5701..5916 | CDD:295325 | 49/235 (21%) | ||
SPEC | 5919..6133 | CDD:238103 | 54/218 (25%) | ||
SPEC | 6137..6350 | CDD:238103 | 49/233 (21%) | ||
SPEC | 6590..6813 | CDD:238103 | 58/232 (25%) | ||
KASH | <6905..6936 | CDD:287506 | 17/30 (57%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 73 | 1.000 | Domainoid score | I9258 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D46at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_104187 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |