Sequence 1: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_004406.2 | Gene: | DSP / 1832 | HGNCID: | 3052 | Length: | 2871 | Species: | Homo sapiens |
Alignment Length: | 2691 | Identity: | 503/2691 - (18%) |
---|---|---|---|
Similarity: | 919/2691 - (34%) | Gaps: | 887/2691 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 11158 LTQEPILISTKEAIGDRIKQLKQASPQQATPLSNVLHLATLSEQIKEL--------PTEQRILEV 11214
Fly 11215 NEGLKDLDVAI----------KNGDKTVIQ--------TTVITVIEKVSTWLETIEYRVYLIRQN 11261
Fly 11262 SNEGPSEEKLDNYNQLNDELSTIKQNVVQLERQLSKAEPEPQLLQCVDSLK----EHVDAVEQVT 11322
Fly 11323 QQNQVQDSNDLDKWHN---FEVLLYNVS------------------------SVLADLQQSYDLL 11360
Fly 11361 INQEYPLSAKL-AQLDELEQQHEAAQQQL----AHLCQNARAFQ---------------RDFPGK 11405
Fly 11406 KMPQDVHNAFETSKNIANNIQAERERVLQLQSLAEEYEQTLKEFTKITVLADKLVESPIVSSSLE 11470
Fly 11471 QLNNEVQKQRKFFVNLSHCRAMLESLEENIDSETREKHSELHKEL-------YNRATSLLDKASE 11528
Fly 11529 RSSKLVQAASRWTVLEKGMRDELQWLQVAQQRVPDLSAV----------TSADYDQY-------- 11575
Fly 11576 TTLYQSLSNDISHHYVKMTQLSGIANKLQLLVQAPNLVEETNEALIVLLK-LREE------VALY 11633
Fly 11634 LHRLLVFKEIWVQYEQQTD--------KLEAFVREAEQELRN--IQIPSQPTHQ-----PIEHMR 11683
Fly 11684 QFWEIKARFELHNNV--------RTDTGLSFE--------------KSLQVIPLADEMLQRQFHA 11726
Fly 11727 QLED--RWQAVAQAIELIQHNIVECLSSEDVPADEKLKMVERELQEIYLTMTSMKGV-------- 11781
Fly 11782 -----------------------IKNEEELCLYIERVQVLRTRVGFIGNEL-------------- 11809
Fly 11810 -------GRIGLQEPAIE------PEKVGELFSLSHKISTQI----------------------- 11838
Fly 11839 -AEELEGASVLRDQLQAIQEGISN--------QRKHQAKISVILDECEAAER------------- 11881
Fly 11882 ------------------------QGADVLEKAVADCQAAGEELVISWQEIMR-IRQMLHTL-PM 11920
Fly 11921 RLKMSVSPV-----KLERDI-SQLQDDHAFL-------ESKCTNIMAILRSRLAVWLRYERQLEL 11972
Fly 11973 VHGSVQETDFMMELIRVHGQV---------------DYERLRKATE-RLEGLAGDLHNREQLIDE 12021
Fly 12022 LKGAAKPLIESCDVQIVEQIESAVQEAVVAWNDTSENLQQLRTRYQRAVELWDKYRNASAAVKNS 12086
Fly 12087 IDQQMDAVKSLEQPLDALQHAKVCQDNLTTQNDRILELRDIVAKIAADVGLDASALMQGELDALG 12151
Fly 12152 QRLAECKDAITTLANVAETQDKERKELDKEVTLAKAYFNNVQQDISREAPQNPKESEEQLAALRA 12216
Fly 12217 HLQ-TLARTEEQLRQLKERHQNSEVAPSVASSDDDGILEVLALWQKIFQDTFQEYHRLSTRLARS 12280
Fly 12281 QNSSEALRLWRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQ 12345
Fly 12346 YKALTNLHNETLSRI-MQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 12409
Fly 12410 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRME-----QASIGQRISNLRAAL 12469
Fly 12470 KTWQGFLQRVTQLSESYEQRVNQLQQEFGAAQKLLDANSESLPTQPAAIEQLLGSLRAQRVQLGA 12534
Fly 12535 QVSALESLTVTQEELKECI--SPHDMKTIRQRNWLLWQQHADLDYQLAN-----LINSIEERLSL 12592
Fly 12593 LSNYQIRYDRISQWLQRLEQRVEKDADVTAMTNPEQAAKQLEQQVNSELQLRDKEREWLLSTSRE 12657
Fly 12658 LLTLYSEPEVRSQVQQQSDSLIDRWQRLKYLAKQKATKIGELKMTLLRLEERIALIRAWLFEVES 12722
Fly 12723 QLDKPLNFESYTPNVIEAKLKEHEQIQRSIEHHSSNVGEVLNLVEMLLNDADSWRTQVNTSGLAA 12787
Fly 12788 SAQNLEQRWKNVCSQSA-ERKARILTIWNL----LQQLIK-LTAEHKNWLGKQESQIAGFERDQK 12846
Fly 12847 SHSKHKLEERQMELRAKLEELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKVMVSMWRQ 12911
Fly 12912 LTPRCHALLDAIDKDAKLMREFNNAQLEATNSLNAIQKALEQLPSAENQ-QTSKAEPKAVLQRLE 12975
Fly 12976 SLEKKLQDAQQ---HVQQADNLAQEAKTRTKQQPQLKQLLELVSAYTTLWQTVQTRIVTLKTTWL 13037
Fly 13038 TRAAQAAASLPV-------------SEAANAAVQVNTLSQRKLRQAQQMQRETSITAKDAYIMEL 13089
Fly 13090 QTAITECQNNLDELQRTVVDKTRKPGPQ-----KIAKLLGNAQSSTELVKHLSHLLLTECKADDQ 13149
Fly 13150 AAEVDTVAELTLRFDTLQSQWKARQQHDQNASEVGRLTCPLCTQRNWQQIDNDLWRLEQWLQFAE 13214
Fly 13215 STQKAQSAPPSNIELLEDVTQDHREFLLDLESHKSIISSLNVVGDHLATH-----TLDTEKARQL 13274
Fly 13275 -----RSRLEA---------DNERWNNVCINATKWQGLL-----------QTALMG-----NSEF 13309
Fly 13310 HQTIGELVEWLQRTEQNIKASEPVDLTEERSVLETKFKKFKDLRAELERC--EPRV--------- 13363
Fly 13364 -----------VSLQDAADQ-LLRSVEGSEQQS-QHTYERTLSRLTDLRLRLQSLRRLSGIYIVK 13415
Fly 13416 LGAVLG-YEGDNLGVPLHMLSSELLD 13440 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
SPEC | 9546..9732 | CDD:295325 | |||
sbcc | 11187..12008 | CDD:129705 | 202/1126 (18%) | ||
SMC_prok_B | 11614..12442 | CDD:274008 | 181/1033 (18%) | ||
SPEC | 11994..12156 | CDD:295325 | 33/162 (20%) | ||
SPEC | 12374..12564 | CDD:295325 | 30/196 (15%) | ||
Lipase_chap | 12376..12529 | CDD:281297 | 24/157 (15%) | ||
SPEC | 12703..12923 | CDD:238103 | 43/225 (19%) | ||
SPEC | 12816..13032 | CDD:295325 | 49/224 (22%) | ||
SPEC | 13196..13374 | CDD:238103 | 42/235 (18%) | ||
KASH | 13484..13540 | CDD:287506 | |||
DSP | NP_004406.2 | Globular 1 | 1..1056 | 187/1067 (18%) | |
Interaction with plakophilin 1 and junction plakoglobin | 1..584 | 105/583 (18%) | |||
SPEC | 190..366 | CDD:295325 | 32/177 (18%) | ||
SPEC | 285..450 | CDD:238103 | 46/214 (21%) | ||
PRK03918 | <770..1251 | CDD:235175 | 93/524 (18%) | ||
Cast | 1025..1674 | CDD:287183 | 172/899 (19%) | ||
Central fibrous rod domain | 1057..1945 | 238/1221 (19%) | |||
GBP_C | <1311..1405 | CDD:303769 | 30/195 (15%) | ||
coiled coil | 1375..1386 | CDD:293879 | 3/14 (21%) | ||
coiled coil | 1395..1405 | CDD:293879 | 1/9 (11%) | ||
End3 | <1507..1655 | CDD:289527 | 40/189 (21%) | ||
Taxilin | 1517..1832 | CDD:286771 | 92/425 (22%) | ||
Globular 2 | 1946..2871 | 78/399 (20%) | |||
4.5 X 38 AA tandem repeats (Domain A) | 1960..2208 | 54/295 (18%) | |||
Plectin | 2048..2086 | CDD:279071 | 8/37 (22%) | ||
PLEC | 2084..2121 | CDD:197605 | 4/36 (11%) | ||
Plectin | 2123..2164 | CDD:279071 | 8/40 (20%) | ||
4.5 X 38 AA tandem repeats (Domain B) | 2244..2446 | 15/53 (28%) | |||
Plectin | 2253..2293 | CDD:279071 | 12/42 (29%) | ||
Plectin | 2291..2331 | CDD:279071 | 2/3 (67%) | ||
PLEC | 2328..2364 | CDD:197605 | |||
Plectin | 2366..2407 | CDD:279071 | |||
Plectin | <2468..2498 | CDD:279071 | |||
4.5 X 38 AA tandem repeats (Domain C) | 2609..2822 | ||||
PLEC | 2611..2647 | CDD:197605 | |||
Plectin | 2649..2688 | CDD:279071 | |||
Plectin | 2725..2766 | CDD:279071 | |||
PLEC | 2762..2799 | CDD:197605 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2810..2871 | ||||
6 X 4 AA tandem repeats of G-S-R-[SR] | 2824..2847 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0516 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |