DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msp300 and M116.5

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:NP_501432.4 Gene:M116.5 / 177642 WormBaseID:WBGene00019792 Length:1020 Species:Caenorhabditis elegans


Alignment Length:1150 Identity:209/1150 - (18%)
Similarity:384/1150 - (33%) Gaps:372/1150 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1755 KKQKLLENQPETVIETK---------------VVEIVKPQQEITEPQTEITEPLNTTSAITTDNN 1804
            |..||:..:||.::|..               .|.:::.:..:...|.|     .|....||::.
 Worm   110 KNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQVSVIRQRLLLESSQHE-----QTNEKHTTNSQ 169

  Fly  1805 QTVSSEQTTVSDDSGL---IKTTVIRTTKIVKKISNNQQESQEMNSSTY-------------SDA 1853
            .::...:||.:.|:.|   .:||.......|...||:.::....|:..:             ||:
 Worm   170 DSIHRSETTSARDALLQWAKRTTAEYPRGNVINFSNSWRDGLAFNAIIHRYRSSAIDWNKINSDS 234

  Fly  1854 PSSLGSYDLAEEAIEPAKIEKSESNSREISDEGVVKTTKTTTTK-------TIISPKVEEVQEEP 1911
            .|:....::|..|.:           ||...|.::......|..       |.:|.....:.:||
 Worm   235 VSNTERLNIAFAAAD-----------REFGVERLLDAEDVDTNNPDEKSIITYVSSLYNALPQEP 288

  Fly  1912 SLQVTSTVSPPIDIESEEGGVIKTTIVRTTKIVKKISNETENISETSSEPEVSLPIV--ETVIQD 1974
            .:...:.          .||      .|..:.:.|:..:.::|.|       :|.::  :..:|:
 Worm   289 EMSKFAA----------SGG------KRLEEEIGKLQADADHIFE-------ALAVISKDEALQE 330

  Fly  1975 APVVAESVTTESNSDGITKTTTTRTTKVVAKTVTENEQEILNLPDVPVEPENTTVLGVIETVELP 2039
            :|                  :....:|.|:|.: |..:.:|.|    ||.:..|.:...:.|...
 Worm   331 SP------------------SLLLVSKQVSKKI-EQLKVLLKL----VEEKKDTFISKCKLVMRT 372

  Fly  2040 EVPEAPVGVEDKLLVTATSTKLSKANQEKSKILDFISAEQNATDKYIAPGKTVPQIPVIEELENS 2104
            ..||:.....|.|        :.......|.:.:.||.::...|:..|.......:|..|.|..:
 Worm   373 AGPESDAKELDSL--------MKHVEDAYSDVFELISDKEGLIDRCNASNINSDSVPNTESLNLA 429

  Fly  2105 YPIEESTAPEPESSGVGDVVKTTIVRTTKIVKKVTQNTEQS-----VNVIIDAPEPETEKTEPEE 2164
            :     .|.:|| .|.|.::....|.|       ..|.::.     |:.:.:||:      :||.
 Worm   430 F-----AAADPE-FGAGRLLDAEDVDT-------NNNPDEKPVITYVSSLKNAPQ------DPEM 475

  Fly  2165 PIEEASGGVTKTTTVRTTKIVKKLNEDGETTTEETRTASDPVTVREPSPAFSEVPSDTSTTSSQI 2229
            ....||||      ....:.:.||..|.:...|       .:.|.....|..|.||         
 Worm   476 SRLAASGG------KGFEEEIGKLQADADHIFE-------ALAVMSKDEALQESPS--------- 518

  Fly  2230 DGAIIKTTTIRTMRITKRVSNDGRIHLTESETPSDVIVTSSIEMPDQRPISPLISSRSTSPAVTP 2294
              .::.:..||..:|.|         |.|...|.:       |..|                 |.
 Worm   519 --LLLYSKQIRFNKIQK---------LKELLKPVE-------EKKD-----------------TF 548

  Fly  2295 SSELKLDNLGANIQLGLKDSPTGVKVIGIETSTENLPKLSEQ---------QLATSKTNGDINTT 2350
            .||.||                .:|..|.|..|:.|..|.:|         :|.:.| .|.|:..
 Worm   549 ISECKL----------------VMKTAGPEADTKELDSLLKQVEDAYSDVFELISDK-EGLIDRC 596

  Fly  2351 DSITTTTTTTRNTILTTTQRRSFETEDGTNVLFVGEGIDGAYPPGTVQKISLITHEEKLKT--PI 2413
            ::....:.:..||........:.:.|.|...|...|.:|....|   .:.|:||:...|..  |:
 Worm   597 NASNINSDSVSNTERLNIALAAADAEFGAGRLLDAEDVDTNNNP---DEKSIITYVSSLNNAFPL 658

  Fly  2414 VKMHLDFPEVSLRVT---ETVTENVESLQRTAESNENSVIEVVELSKSEVPEAIELKTAPVDDHV 2475
            .      ||:|..|.   :.:.|.:..||..|                              ||:
 Worm   659 E------PEMSKYVASGGKRLEEEIGKLQADA------------------------------DHI 687

  Fly  2476 SKLDELVKIPEA---TPTVLPESNPAELSPEEQKLFEDIQKKLSKKDKKKRPAIPEEFIKQETVQ 2537
            .|..|.:...||   :|::|.:|.      :..|..|.::..|...::||...|.|..:..:||.
 Worm   688 FKALEEISKDEALQESPSLLLDSK------QVSKKIEQLKVLLKPVEEKKDTFISESKLVMKTVG 746

  Fly  2538 VLLEESKGNDAPNVVPVVEE-LTDVAKPLDKQDPVAPSVNVEIVSETTLVSNTDDGEVD-----T 2596
               .||...:..:::..||: .:||               ||::|:       .:|.:|     .
 Worm   747 ---PESDAKELDSLMKHVEDAYSDV---------------VELISD-------KEGLIDRCNASN 786

  Fly  2597 KLI-PVPESEKLLN---IFEDSSLISTSKLIEQSNSEILYH------ESIVEVVPVST------- 2644
            ::. |..|:||:.|   :.:::....|...||:. ||..|.      :.:|.::..:.       
 Worm   787 RIAHPQTETEKITNEIELLKETCSCCTPYQIEKI-SENYYRFGDTHIKRMVRILRSTVMVRVGGG 850

  Fly  2645 ----QEEVQVENPCETQSSPAPTNIANEIVPDK---HSALIAEAFVANTVS-----------TLS 2691
                :|.:|..:||.|:..   .||  .:.|:.   |:..:.::|..|..:           .:.
 Worm   851 WEPLEESLQKHDPCRTKGR---LNI--NMFPEARPIHALDLMQSFTKNRHAKQMPIAGTPGPIMK 910

  Fly  2692 IITNIEKLSPLN---------------------KIFEIPKFDISKFTIAEGNYHII-NSKTKPIE 2734
            |....|:..|::                     :.|.||:....|....:.....: |.|...:|
 Worm   911 IREKTERSVPMSGGLGGTAGYTVTTESPRKTPQRPFRIPRTPSDKTPGRQSRVGCVSNLKNSIVE 975

  Fly  2735 KLDPTETVPVSPP------KSVSVDIDTETKMESTVTDVGSTTTT 2773
            ...|:::...:.|      |.:|:.:..:.|..|  ..||.:::|
 Worm   976 PSSPSQSESRASPEVADRQKRISLSLKEKGKRYS--PQVGPSSST 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705
SMC_prok_B 11614..12442 CDD:274008
SPEC 11994..12156 CDD:295325
SPEC 12374..12564 CDD:295325
Lipase_chap 12376..12529 CDD:281297
SPEC 12703..12923 CDD:238103
SPEC 12816..13032 CDD:295325
SPEC 13196..13374 CDD:238103
KASH 13484..13540 CDD:287506
M116.5NP_501432.4 CH 41..142 CDD:237981 6/31 (19%)
CH 179..285 CDD:237981 19/116 (16%)
CH <610..652 CDD:294029 9/44 (20%)
GAS2 796..868 CDD:128539 15/72 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D46at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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