DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Msp300 and Evpl

DIOPT Version :9

Sequence 1:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster
Sequence 2:XP_036012216.1 Gene:Evpl / 14027 MGIID:107507 Length:2121 Species:Mus musculus


Alignment Length:2068 Identity:400/2068 - (19%)
Similarity:728/2068 - (35%) Gaps:662/2068 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly 11403 PGKKMPQ---DVHNAFET-------SKNIANNIQAERERVLQLQSLAEEYEQTLKEFTKITVLAD 11457
            |.|..|:   :.||...|       |:..||..|.||: :|:.|...::..|..::         
Mouse    19 PAKGSPKGSPNKHNRAATQELALLISRMQANADQVERD-ILETQKKLQQDRQNGEQ--------- 73

  Fly 11458 KLVESPIVSSSLEQLNNEVQKQRKFFVNLSHCRAMLESLEENIDSETREKHSELH------KELY 11516
                           |..:|.|::...||.....:|:.|..::|...|.||.:..      |:|:
Mouse    74 ---------------NQALQHQQETGRNLKEAEVLLKDLFLDVDKARRLKHPQAEEIEKDIKQLH 123

  Fly 11517 NRATSLLDKASERSSKLVQAASRWTVLEKGMRDELQWLQVAQQRVPDLSAVTSADYDQYTTLYQS 11581
            .|.|   .:.||     .:|.....||...:...:.|.:|.:|:   .:.|....|.....   .
Mouse   124 ERVT---QECSE-----YRALYEKMVLPPDVGPRVDWARVLEQK---QNLVREGHYGPGMA---E 174

  Fly 11582 LSNDISHHYVKMTQLSGIANKLQLLV--QAPNLVEETNEALIVLLKLREEV-ALYLHRLLVFKEI 11643
            |...::.|.:...::.....:|:.||  .|..:..:..|.|......|:.: :||.|.....|::
Mouse   175 LEQQVAEHNILQREIEAYGQQLRTLVGPDANTIRNQYRELLKAASWRRQSLGSLYTHLQGCTKQL 239

  Fly 11644 WVQYEQQTDKLE----------AFVREAEQEL---------RNIQIPSQPTHQPIEHMRQFWEIK 11689
            ....:||...|:          |.||. |.|:         |....||..:          |  .
Mouse   240 SALADQQGRILQQDWSDLMPDPAGVRR-EYEVCGDRLRPGQRGCLGPSSCS----------W--P 291

  Fly 11690 ARFELHNNVRTDTGLSFEKSLQVIPLADEMLQRQFHAQLEDRWQAVAQAIELIQHNIVECLSSED 11754
            :||....:.:....|:.|:|:.               ||||                        
Mouse   292 SRFNRPQHFKQHELLAQERSIN---------------QLED------------------------ 317

  Fly 11755 VPADEKLKMVERELQEIYLTMTSMKGVIKNEEELCL----YIERVQVLRTRVGFIGNELGRIGLQ 11815
             .||..:::....:..|.:...::|...:|...||:    .::||:..|.             .|
Mouse   318 -DADRMVELGHPAIGPIQVHQEALKMEWQNFLNLCICQESQLQRVEDYRR-------------FQ 368

  Fly 11816 EPAIEPEKVGE-LFSLSHKISTQIAEELEGASVLRDQLQAIQEGISNQRKHQAKISVILDECEAA 11879
            |   |.:.|.: |..||..:.|:.                   |........:...::| :.||.
Mouse   369 E---EADSVSQTLAKLSSNLDTKY-------------------GFGTGDSSGSPTELLL-QLEAE 410

  Fly 11880 ERQGADVLEKAVADCQAAGEEL------------------VISWQ--EIMRIRQMLHTLPMRLKM 11924
            |:|.| :.|:||.|.|...:|:                  :..|.  |:..:|...:|    ||.
Mouse   411 EKQLA-IAERAVGDLQQRSQEVAPLPQRRNPSKQPLHVDSICDWDSGEVQLLRGERYT----LKD 470

  Fly 11925 SVSP------------------------------VKLERDISQLQDDHAFLESKCTNIMAILRSR 11959
            :..|                              .|..|..::||.....|.::...:.|.....
Mouse   471 NADPYTWLVQGPGGETKSAPAACLCIPAPDPEAVAKASRLATELQTLKQKLSTEKNRLKAAAVEH 535

  Fly 11960 L-----------------AVWL------------------------------RYERQLELVH--- 11974
            |                 |.|:                              |::..|.|:.   
Mouse   536 LQPGQQGTRGWSGRANGWACWVGGTPSRLFFPQSGPAHPPGPAGTQGGPISGRHKTSLALLSPAP 600

  Fly 11975 -GSVQETDFMMELIRVHGQVDYERLRKATERLEGLAGDLHNREQLIDELKGAAKPLIESCDVQIV 12038
             ||.........|:....|:|               |||...|:.:  |..|..||.:|..::.:
Mouse   601 AGSAPADPQGQTLLSQMTQLD---------------GDLGQIERQV--LSWARSPLSQSSSLKDL 648

  Fly 12039 E-QIESAVQEAVVAWNDTSENLQQLRTRYQRAVELWDKYRN----ASAA-----VKNSIDQQMDA 12093
            | :|.|.        ..|::.||.|....:.|.:..:.:.:    .|||     |.||:..:.:.
Mouse   649 EGRIHSC--------EGTAQRLQSLGAEKEAAQQECEAFLSTKPTGSAALQLPVVLNSVKNRYND 705

  Fly 12094 VKSL-----EQPLDALQHAKVCQDNLTTQNDRILELRDIVAKIAADVGLDASALMQGEL----DA 12149
            |:||     |:...||...|..|     :.||:::            |.:|:..::|.:    .|
Mouse   706 VQSLCHLYGEKAKAALGLEKQIQ-----EADRVIQ------------GFEAALALEGPVPEGSGA 753

  Fly 12150 LGQRLAECKDAITTLANVAETQDKERKELDKEVTLAKAYFNNVQQD-----ISREAPQNPKESEE 12209
            |.:|::|.:              ::||||             :||.     :.|:.    |.:|.
Mouse   754 LQERVSELQ--------------RQRKEL-------------LQQQACVLGLHRQL----KATEH 787

  Fly 12210 QLAALRAHL----QTLARTEEQLRQLKERHQNSEVAPSVASSDDDGILEVLALWQKIFQDTFQEY 12270
            ..:||:.:.    |.|.|.:.|:|.|.:|:.              .:.:.|.|.:||.||....|
Mouse   788 ACSALQNNFQEFCQDLPRQQRQVRALTDRYH--------------AVGDQLDLREKIVQDASLTY 838

  Fly 12271 HRLSTRLARSQNSSEALRLWRQYLQH--VQSFLSCAIPEDYSS-----LREQQQLCAIHQNLLIS 12328
            .:|       :||.:.|..|.:.|.|  ||       |.|..|     |:.|::|.   |.:|..
Mouse   839 QQL-------RNSRDNLSSWLEQLPHHRVQ-------PSDGPSQISYKLQAQKRLI---QEILGR 886

  Fly 12329 QQSVLSETPLESELSE---QYKALTNLHNETLSRIMQRNGELERRVSGW------------NAYR 12378
            :|...:.:.|..:|.|   .|:...:.:..:|...:..:.....||...            .||.
Mouse   887 EQDQATVSRLTRDLQEALQDYELQADTYRCSLEPALAVSAPKRLRVISLQESIQAQEKNLAKAYT 951

  Fly 12379 QQLAALLDWLRQREAERNALQLRYIHLKRVPHLKHRLDAMIQQLDQGEQQSKALQEQQQELARHC 12443
            :..||....|||.|..:..|:            |..||..||.:....|.|.:        ..|.
Mouse   952 EVAAAEQQQLRQLEFAKKMLR------------KKELDEDIQAIHSARQGSGS--------PAHA 996

  Fly 12444 DDALATAMRMEQASIGQRISNLRAALKTWQGFLQRVTQLSESYEQRVNQLQQEFGAAQKLLDANS 12508
            ..|.:..::.:.....:|::.::..|:..:   ||:.||..  :|.|.:|::: ...:...|...
Mouse   997 RTAESEVLKTQLEEERKRVAEVQRDLEEQR---QRLLQLRT--QQPVARLEEK-EVVEFYRDPQL 1055

  Fly 12509 ESLPTQPAAIEQLLGSLRAQRVQLGAQVSALESLTVTQEELKECISPHDM-KTIRQRNWLLWQQH 12572
            ||..:|.|:..:..|..||   :|.|::.|:....|..|..::.:.||.: |.:.|     .::.
Mouse  1056 ESNLSQAASRVEEEGKRRA---RLQAELEAVAQKVVHLEGKRKTMQPHLLTKEVTQ-----IERD 1112

  Fly 12573 ADLDYQLANLINSIEERLSLLSNYQIRYDRISQWLQRLEQ---------------RVEKDADVTA 12622
            ..||.|:..|.:.::...........|.:.:...|..|||               :||||.::. 
Mouse  1113 PGLDSQVTQLHSEMQRLRGENGVLTARLEELKDELLALEQKEMNVKEKVVVKEVVKVEKDLEMV- 1176

  Fly 12623 MTNPEQAAKQLEQQVN-------------SELQLRDKEREWLLST------SRELLTLYSEP--- 12665
                 :||:.|..|:.             :::|.|.|:.|..:|:      .:|:..:..:|   
Mouse  1177 -----KAAQTLRLQIEEDAARRKGAKETVAKIQARIKDLEQAISSVEPKVIVKEVKKVEQDPGLL 1236

  Fly 12666 ----EVRSQVQQQSDS-------LIDRWQRLKYLAKQK-----ATKIGELKMTLLRLEERIALIR 12714
                .:||.::::.::       |.:..::.:.:.|||     ..::.|:...|...|:.|..:|
Mouse  1237 KEASRLRSLLEEEKNNNVALARELQELQEKYRVVEKQKPKVQLQERVSEIFQVLPETEQEIRRLR 1301

  Fly 12715 AWLFE-------VESQLDKPL-------------NFESYTPNVIEAKLKEHEQIQRSIEHHSSNV 12759
            |.|.|       ||.:::|.|             .::..|..|:  :.:::.::.|.|:...:.:
Mouse  1302 AQLQETGSKKSGVEQEVEKLLPELEVLRAQKPVVEYKEVTQEVV--RHEKNPEVLREIDRLKAQL 1364

  Fly 12760 GEVLN--------LVEMLLNDADSW---RTQVNTS-------------GLAASAQNLEQRWKNVC 12800
            .|::|        |:. |..:.|.|   |::|.|.             .|...|:.|.|..:...
Mouse  1365 NELVNTNGRSQEQLIR-LQGERDEWKRERSKVETKMVSKEVVRHEKDPVLEKEAERLRQEVREAV 1428

  Fly 12801 SQSAERKARILTIWNLLQQLIKLTAEHKNWLGKQESQIAGFE----------RDQKSHSKHKLEE 12855
            .:   |:|....::.|..:|:.|...      :.|.||...|          |::.|.....|:|
Mouse  1429 QR---RRATEDAVYELQNKLLLLERR------RPEEQIVVQEVVVTQKDPKLREEHSRLSRSLDE 1484

  Fly 12856 -----RQMELR-----AKLEELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKVMVSMWR 12910
                 ||:||.     |::||.|::   |...|....|||..     ..:::|||  |:     :
Mouse  1485 EVGRRRQLELEVRQLGARVEEEEAR---LSFEEDRSKKLAAE-----RELRQLTL--KI-----Q 1534

  Fly 12911 QLTPRCHALLDAI--------DKDAKLMREFNNAQLEATNSLNAIQKALEQLPSAENQ----QTS 12963
            :|..|..||.:.|        :||..|.|.....:.|.....|.:.:...:....:.|    |.:
Mouse  1535 ELEKRPPALQEKIIMEEVVKLEKDPDLERSTEALRRELDQEKNRVTELHRECQGLQVQVDLLQKT 1599

  Fly 12964 KAEPKAVLQRLESLEKK--LQDAQQHVQQADNLAQEAKTRTKQQPQLKQLLELVSAYTTLWQTVQ 13026
            |::.|.:.:.:..:||.  |:..:..|.:.  |.:|...|..::..::.|.|.:.          
Mouse  1600 KSQEKTIYKEVIRVEKDPVLEGERARVWEI--LNRERAARKGREEDVRSLQERID---------- 1652

  Fly 13027 TRIVTLKTTWLTRAA--QAAASLPVSEAANAAVQVNTLSQRKLRQAQQMQRETSITA-------- 13081
             |...|:.:|....|  |.|......:......|:..|.|:|.::|:|:|.|..:.:        
Mouse  1653 -RAEALRRSWSREEAELQRARDQASQDCGRLQRQLRELEQQKQQKARQLQEEGRLLSQKTESERQ 1716

  Fly 13082 ----KDAYIMELQTAITECQNNLDELQRTVVDKTRKPGPQKIAKLLGNAQSST 13130
                :...:.:|:.||.:.::.:.|.:||:.|...|...:::     |.::.|
Mouse  1717 KAAQRSQAVTQLEAAILQEKDKIYEKERTLRDLHTKVSREEL-----NQETQT 1764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705 129/748 (17%)
SMC_prok_B 11614..12442 CDD:274008 189/1003 (19%)
SPEC 11994..12156 CDD:295325 40/180 (22%)
SPEC 12374..12564 CDD:295325 43/202 (21%)
Lipase_chap 12376..12529 CDD:281297 35/152 (23%)
SPEC 12703..12923 CDD:238103 62/283 (22%)
SPEC 12816..13032 CDD:295325 53/249 (21%)
SPEC 13196..13374 CDD:238103
KASH 13484..13540 CDD:287506
EvplXP_036012216.1 SPEC <302..>387 CDD:413338 24/140 (17%)
SH3_10 433..497 CDD:407754 7/67 (10%)
RGS 666..>810 CDD:413378 38/191 (20%)
Smc <753..1096 CDD:224117 94/433 (22%)
SMC_prok_B 937..1732 CDD:274008 172/874 (20%)
Plectin <1775..1803 CDD:395552
PLEC 1907..1942 CDD:197605
Plectin 1944..1983 CDD:395552
PLEC 1981..2018 CDD:197605
Plectin 2022..2059 CDD:395552
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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