Sequence 1: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001076483.2 | Gene: | syne3 / 100009645 | ZFINID: | ZDB-GENE-070209-271 | Length: | 1100 | Species: | Danio rerio |
Alignment Length: | 1408 | Identity: | 296/1408 - (21%) |
---|---|---|---|
Similarity: | 509/1408 - (36%) | Gaps: | 442/1408 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 12266 TFQEYHRLSTRLARSQNSSEALRLWRQYLQH----------VQSFLSCAIPEDYSSLREQQQLCA 12320
Fly 12321 IHQNLLISQQSVL--SETPL---ESELSEQ----YKALTNLHNETLSRIMQRNGELERRVSGWNA 12376
Fly 12377 YRQQLAALLDWLRQREA-ERNALQLRYIHLKRVPHLKHR--LDAMIQQLDQGEQQSKALQEQQQE 12438
Fly 12439 LARHCDDALATAMRMEQASIGQRISNLRAALKTWQGFLQRVTQLSESYEQRVNQLQQEFGAAQKL 12503
Fly 12504 -----------------LDANSESLPTQPAAIEQLLGSLRAQRVQLGAQVSALESLTVTQ-EELK 12550
Fly 12551 ECI----SPHDMKTIRQ---RNWLLWQQHADLDYQLANLINSIEERLSLLSNYQIRYDRISQWLQ 12608
Fly 12609 RLEQRVEKDADVTAMTNPEQAAKQLEQQVNSELQLRDKEREWLLSTSRELLTLYSEPEVRSQVQQ 12673
Fly 12674 QSDSLIDRWQ-----RLKYLAKQKATKIGELKMTLLRLEERIALIRAWLFEVESQLDKPLNFESY 12733
Fly 12734 TPNVIEAKLKEHEQIQ-RSIEHHSSNVGEVLNLVEMLLNDADSWRTQVNT-----------SGLA 12786
Fly 12787 ASAQNLEQRWKNVCSQSAERKARILTIWNLLQQLIKLTAEHKNWLGKQESQIAGFERDQKSHSKH 12851
Fly 12852 KLEERQMELRAKLEELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKVMVSMWRQLTPRC 12916
Fly 12917 HALLDAIDKDAKLMREFNNAQLEATNSLNAIQKALEQLPSAENQQTSKAEPKAVLQRLESLEKKL 12981
Fly 12982 QDAQQHVQQADNLAQEAKT-RTKQQPQLKQLLELVSAYTTLWQTVQTRI---------------- 13029
Fly 13030 VTLKTTWLTRAAQAAASLPVSEAANAAVQVNTLSQRKLRQAQQMQRETSITAKDAYIMELQTAIT 13094
Fly 13095 ECQNNLDELQRTVVDKTRKPGPQKIAKLLGNAQSSTELVKHLS---HLLLTECKADDQAAE---- 13152
Fly 13153 ------------VDTVAELTLRF-----DTLQSQWKARQQHDQN---ASEVGRLTCPLCTQRNWQ 13197
Fly 13198 QIDNDLWRLEQWLQFAESTQKAQSAPPSNIELLEDVTQDHREFLLDLESHKSIISSLNVVGD--- 13259
Fly 13260 -HLATHTLD---------TE----KARQLRSRLEADNERWNNVCINATKWQGLLQTALMGNSEFH 13310
Fly 13311 QTIGELVEWLQRTEQNIKASEPVDLTEERSV----LETKFKKFKDLRAELERCEPRVVSLQDAAD 13371
Fly 13372 QLLRSVEGSEQQSQHTYERTLSRLTDLRLRLQSLRRLSGIYIVKLGAVLGYEGDNLGVPLHMLSS 13436
Fly 13437 ELLDNTTLSTSSMQAAAPNTENANNTDGGDAVDGDV---INTTVLARGARFLGRVARASLPIQAL 13498
Fly 13499 MLLLLGVATLVPHGEDYT-CMFSNTFARSLEPMLSYPHGPPPT 13540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
SPEC | 9546..9732 | CDD:295325 | |||
sbcc | 11187..12008 | CDD:129705 | |||
SMC_prok_B | 11614..12442 | CDD:274008 | 46/197 (23%) | ||
SPEC | 11994..12156 | CDD:295325 | |||
SPEC | 12374..12564 | CDD:295325 | 51/217 (24%) | ||
Lipase_chap | 12376..12529 | CDD:281297 | 36/172 (21%) | ||
SPEC | 12703..12923 | CDD:238103 | 42/231 (18%) | ||
SPEC | 12816..13032 | CDD:295325 | 38/232 (16%) | ||
SPEC | 13196..13374 | CDD:238103 | 40/198 (20%) | ||
KASH | 13484..13540 | CDD:287506 | 28/56 (50%) | ||
syne3 | NP_001076483.2 | SPEC | 114..322 | CDD:295325 | 55/238 (23%) |
KASH | <1070..1100 | CDD:287506 | 14/30 (47%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0516 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm24207 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR47535 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.000 |