DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment waw and AT5G39900

DIOPT Version :9

Sequence 1:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_198806.2 Gene:AT5G39900 / 833987 AraportID:AT5G39900 Length:663 Species:Arabidopsis thaliana


Alignment Length:656 Identity:313/656 - (47%)
Similarity:430/656 - (65%) Gaps:36/656 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SLLVRNLSTTNQ----------------VKGETEEPSQADLLREFAHMPVERIRNFSIIAHVDHG 111
            |:|..:|::..|                .:..::||: .||.:    .|.|:|||||||||:|||
plant    19 SILFNSLNSNRQNPTCIGLYQAYGFSSDSRQSSKEPT-IDLTK----FPSEKIRNFSIIAHIDHG 78

  Fly   112 KSTLADRLLELTGAIARNGGQHQVLDNLQVERERGITVKAQTASIFHRHK-----GQLYLLNLID 171
            ||||||||:||||.|.:..||.|.||.||||||||||||||||::|:.:|     ...|||||||
plant    79 KSTLADRLMELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYENKVEDQEASGYLLNLID 143

  Fly   172 TPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQ 236
            ||||||||.||||||:||.|.:|:|||..|||||||||::||.:..|.:|||:||||...|:|::
plant   144 TPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQTVANFYLAFEANLTIVPVINKIDQPTADPER 208

  Fly   237 VCQDLKLLFGIDPDEVLRVSAKLGTGVSEVLERVIETVPPPQVQRDSDFRALIFDSWFDKYRGAL 301
            |...||.:|.:|.::||.||||.|.|:..||..|||.:|||....:|..|.|:|||:|::|:|.:
plant   209 VKAQLKSMFDLDTEDVLLVSAKTGLGLEHVLPAVIERIPPPPGISESPLRMLLFDSFFNEYKGVI 273

  Fly   302 NLIYVLNGKLEQNQDIQSLATKKVYSVKSISVLRPAECPVPDVSAGQVGLIACNMRNSKESIVGD 366
            ..:.|::|.|.:...:...|:.:.|.|..:.::.|.......:..||||.|...||.:||:.:||
plant   274 CYVSVVDGMLSKGDKVSFAASGQSYEVLDVGIMHPELTSTGMLLTGQVGYIVTGMRTTKEARIGD 338

  Fly   367 TIHLKNQAVAAAGSYRPQQPLVFAGVFPADQSKHVALRSAIDKMVLNDSAVTVKIDSSPALGQGW 431
            ||:.....|.....::|.:.:||:||:|||.|...||..|::|:..||::|:|..::|.|||.|:
plant   339 TIYRTKTTVEPLPGFKPVRHMVFSGVYPADGSDFEALGHAMEKLTCNDASVSVAKETSTALGMGF 403

  Fly   432 RLGFLGLLHMEVFCQRLEQEHGAEPIITAPSVTYRLVLSNPKMIKQQGRDTMDISNAALFPE--P 494
            |.||||||||:||.||||||:|.:.|.|.|:|.|....|:...::        :.|.|..|.  .
plant   404 RCGFLGLLHMDVFHQRLEQEYGTQVISTIPTVPYTFEYSDGSKLQ--------VQNPAALPSNPK 460

  Fly   495 HSIKEYYEPLVLGTIITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIILDFHDR 559
            :.:...:||.|:.|||.|:||||.||:||.:|||.|.....||..||.:||.|||.||::||:|.
plant   461 YRVTASWEPTVIATIILPSEYVGAVINLCSDRRGQQLEYTFIDAQRVFLKYQLPLREIVVDFYDE 525

  Fly   560 LKSLSSGYASFSYEDHGYHPSHLVRLDIHLNGKPVEELCRIVHVSKATGVARQMVLKLRELIPKQ 624
            |||::||||||.|||..|..|.||:|||.|||:.|:.|..|||..||..|.:::|.||:..|.:|
plant   526 LKSITSGYASFDYEDAEYQASDLVKLDILLNGQAVDALATIVHKQKAYRVGKELVEKLKNYIERQ 590

  Fly   625 MVQIAIQACVGSKVLARETIKAYRKDVTAKLYGGDVTRRMKLLKQQAEGKKKMRMFANIRVPHET 689
            |.::.|||.:|||::||:||.|.||:|.||.||||:||:.|||::|.||||:|:...::.:|||.
plant   591 MFEVMIQAAIGSKIIARDTISAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSVDIPHEA 655

  Fly   690 FINVLK 695
            |..:||
plant   656 FQQILK 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wawNP_001027089.1 PRK05433 94..695 CDD:235462 303/607 (50%)
LepA 100..277 CDD:206677 115/181 (64%)
EF4_II 285..370 CDD:293900 28/84 (33%)
EF4_III 386..461 CDD:293917 41/74 (55%)
lepA_C 502..581 CDD:239680 46/78 (59%)
LepA_C 589..695 CDD:283959 52/105 (50%)
AT5G39900NP_198806.2 PRK05433 62..662 CDD:235462 305/608 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 222 1.000 Domainoid score I705
eggNOG 1 0.900 - - E1_COG0481
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6505
Inparanoid 1 1.050 578 1.000 Inparanoid score I235
OMA 1 1.010 - - QHG53758
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003399
OrthoInspector 1 1.000 - - otm2510
orthoMCL 1 0.900 - - OOG6_100972
Panther 1 1.100 - - LDO PTHR43512
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.