DRSC/TRiP Functional Genomics Resources

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Protein Alignment waw and mEFG1

DIOPT Version :9

Sequence 1:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster


Alignment Length:740 Identity:161/740 - (21%)
Similarity:267/740 - (36%) Gaps:248/740 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SLLVRNLSTTNQVK-------GETEEPSQADLLREFA-HMPVERIRNFSIIAHVDHGKSTLADRL 119
            ||:.|.|:..|.::       |:....|.|    :|: |.|:|||||..|.||:|.||:||.:|:
  Fly     2 SLITRLLTGNNTLRLRALKSLGKAGYSSHA----KFSEHKPIERIRNIGISAHIDSGKTTLTERI 62

  Fly   120 LELTGAIARNGGQHQV---------LDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGH 175
            |..||.||.   .|:|         :|::::||:||||:  |:|:.:...|..  .:|:||||||
  Fly    63 LFYTGRIAE---MHEVRGKDNVGATMDSMELERQRGITI--QSAATYTLWKDT--NINIIDTPGH 120

  Fly   176 VDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQD 240
            |||:.||.|:|...||.||::.|..|||:||:......|:..:..:..:||:|...:||.:|...
  Fly   121 VDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQ 185

  Fly   241 LK-----------LLFGIDP--------------------------DEV---LRVSA-------- 257
            ::           |..|::.                          ||:   :||.:        
  Fly   186 MRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELI 250

  Fly   258 -----------------------------------------KLGT-----GVSEVLERVIETVP- 275
                                                     .:||     ||..:|:.|::.:| 
  Fly   251 EHLSNADETLGELFLEEKPFTEDDIKAALRRTCINRTFTPVLVGTALKNKGVQPLLDAVLDYLPN 315

  Fly   276 PPQVQ--------------------RD--SDFRALIFDSWFDKYRGALNLIYVLNGKLEQNQDIQ 318
            |.:|:                    ||  ..|..|.|.....:: |.|..:....|.|.:..:|.
  Fly   316 PGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRF-GQLTYLRCYQGVLRKGDNIF 379

  Fly   319 SLATKKVYSVKSISVLRPAEC-PVPDVSAGQV-GLIACNMRNSKESIVGDTIHLKNQAVAAAGSY 381
            :..|.|...:..:..|...:. .|.:|.||.: .|...:..:      |||.....:...:..|.
  Fly   380 NARTNKKVRIARLVRLHSNQMEDVNEVYAGDIFALFGVDCAS------GDTFTTNPKNNLSMESI 438

  Fly   382 RPQQPLVFAGVFPADQSKHVALRSAIDKMVLNDSAVTVKIDS--SPALGQGWRLGFLGLLHMEVF 444
            ...:|:|...:.|.:.........||.:....|.......|:  ...|..|     :|.||:|::
  Fly   439 FVPEPVVSMAIKPNNTKDRDNFSKAIARFTKEDPTFHFFFDNDVKETLVSG-----MGELHLEIY 498

  Fly   445 CQRLEQEHGAEPIITAPSVTYRLVLSNP------------------------------------- 472
            .||:|:|:|....:..|.|.:|..|..|                                     
  Fly   499 AQRMEREYGCPVTLGKPKVAFRETLVGPCEFDYLHKKQSGGSGQYARIIGVMEPLPPNQNTLLEF 563

  Fly   473 ---------------------------------KM------IKQQGRDTMDISNAALFPEPH-SI 497
                                             |:      ::..|...:|.|..|.....| :|
  Fly   564 VDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQDGGHHIVDSSELAFMLAAHGAI 628

  Fly   498 KEYY--------EPLVLGTIITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIIL 554
            ||.:        ||::|..:..|.|:.|.|:....:|.|:...:...:....:...| ||:: :.
  Fly   629 KEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGWFTVYAEV-PLND-MF 691

  Fly   555 DFHDRLKSLSSGYASFSYEDHGYHP 579
            .:...|:|.:.|...|:.|...|.|
  Fly   692 GYAGELRSSTQGKGEFTMEYSRYSP 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wawNP_001027089.1 PRK05433 94..695 CDD:235462 151/701 (22%)
LepA 100..277 CDD:206677 72/280 (26%)
EF4_II 285..370 CDD:293900 19/86 (22%)
EF4_III 386..461 CDD:293917 18/76 (24%)
lepA_C 502..581 CDD:239680 19/78 (24%)
LepA_C 589..695 CDD:283959
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 71/278 (26%)
PRK12740 48..727 CDD:237186 144/690 (21%)
mtEFG1_II_like 347..427 CDD:293908 19/86 (22%)
EFG_III 441..516 CDD:293919 18/79 (23%)
EFG_mtEFG1_IV 519..636 CDD:238715 12/116 (10%)
mtEFG1_C 641..718 CDD:239764 19/78 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464680
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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