DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment waw and SPAC1B3.04c

DIOPT Version :9

Sequence 1:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_594788.2 Gene:SPAC1B3.04c / 2542529 PomBaseID:SPAC1B3.04c Length:652 Species:Schizosaccharomyces pombe


Alignment Length:643 Identity:277/643 - (43%)
Similarity:415/643 - (64%) Gaps:17/643 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RSKSLLVR----NLS-TTNQVKGETEEPSQADLLREFAHMPVERIRNFSIIAHVDHGKSTLADRL 119
            :|.|..:|    ::| .:.::..|..:||..:::|   .:|..|:||:::|||:|||||||:|.:
pombe    17 KSSSFKIRWRFFSVSYASRKLASEDNKPSIQEVVR---GIPQNRVRNWAVIAHIDHGKSTLSDCI 78

  Fly   120 LELTGAIARNGGQHQVLDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGHVDFSNEVSR 184
            |:|||.|..:..::|.||.|:|||.|||||||||.|:.:.:.||.||||||||||||||..||..
pombe    79 LKLTGVINEHNFRNQFLDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMH 143

  Fly   185 SLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQDLKLLFGIDP 249
            |||||:|.:|||||..|:||||::|:::|..:.|.::|||||:|:..|:.|:....::..|.|..
pombe   144 SLAACEGCILLVDASQGIQAQTLSNFYMAFSQNLVIIPVLNKVDLPTADVDRTLIQVQQTFDIPM 208

  Fly   250 DEVLRVSAKLGTGVSEVLERVIETVPPPQVQRDSDFRALIFDSWFDKYRGALNLIYVLNGKLEQN 314
            .:.:.||:|.|..|.::|..:|:.:|||:...::..|.|:.|||::.|:|.:.|:.::.|.:::.
pombe   209 SKPILVSSKTGKNVEQILPEIIQKIPPPKGSENAPLRCLLIDSWYNSYQGVIGLVRIMEGFIKKG 273

  Fly   315 QDIQSLATKKVYSVKSISVLRPAECPVPDVSAGQVGLIACNMRNSKESIVGDTIHLKNQAVAAAG 379
            ..:.|:.|.:.|.|:.:.::.|....|..:.|||||.|..||:|..|:|||||.......|.|..
pombe   274 GKVMSVNTGRKYEVQQVGIMYPDMTEVSRLRAGQVGYIIWNMKNIDEAIVGDTYSTIGSNVEALP 338

  Fly   380 SYRPQQPLVFAGVFPADQSKHVALRSAIDKMVLNDSAVTVKIDSSPALGQGWRLGFLGLLHMEVF 444
            .:...|.:|:.|.||.|.|.:..|...|:::.|||.|:.|:.::|.|||.||||||||.||:.||
pombe   339 GFSIPQSMVYVGAFPLDGSDYERLNDNIEQLALNDRAINVQKENSSALGMGWRLGFLGTLHLSVF 403

  Fly   445 CQRLEQEHGAEPIITAPSVTYRLVLSNPKMIKQQGRDTMDISNAALFPEPH-SIKEYYEPLVLGT 508
            ..||:.|:|.|.:||:|:|.||:...|       ||:.: |||..|||..| .|.|..||.|..|
pombe   404 IDRLKDEYGKELLITSPTVPYRIKYKN-------GREEV-ISNPNLFPTNHQGISELLEPTVDAT 460

  Fly   509 IITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSYE 573
            ||||:||:|.||.||...||||:....:.::|.::||.|||:.::.||..|||..:||:|:..||
pombe   461 IITPSEYLGDVIKLCESCRGLQKDCTYMSESRCMIKYQLPLAHLVEDFFGRLKGTTSGFATLDYE 525

  Fly   574 DHGYHPSHLVRLDIHLNGKPVEELCRIVHVSKATGVARQMVLKLRELIPKQMVQIAIQACVGSKV 638
            :..|.|:.||||.|.::||.|:.||.|||.|.|....|:.:.:|:.|:|||:.::.:||.:.::|
pombe   526 ESDYVPADLVRLSIFMSGKSVDALCSIVHRSLALQRGREWIQRLKPLVPKQLYEVILQAVIDNRV 590

  Fly   639 LARETIKAYRKDVTAKLYGGDVTRRMKLLKQQAEGKKKMRMFANIRVPHETFINVLKR 696
            :|||:|.|.||:||||.|||||||:.|||.:|.||||:::...|:.:....|...|.:
pombe   591 VARESISALRKNVTAKCYGGDVTRKQKLLNKQKEGKKRLKSVGNVSIDKSVFYEFLTK 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wawNP_001027089.1 PRK05433 94..695 CDD:235462 268/601 (45%)
LepA 100..277 CDD:206677 90/176 (51%)
EF4_II 285..370 CDD:293900 30/84 (36%)
EF4_III 386..461 CDD:293917 36/74 (49%)
lepA_C 502..581 CDD:239680 37/78 (47%)
LepA_C 589..695 CDD:283959 47/105 (45%)
SPAC1B3.04cNP_594788.2 LepA 50..646 CDD:223557 269/606 (44%)
LepA 59..236 CDD:206677 90/176 (51%)
EF4_II 244..326 CDD:293900 28/81 (35%)
EF4_III 345..420 CDD:293917 36/74 (49%)
lepA_C 454..533 CDD:239680 37/78 (47%)
LepA_C 543..646 CDD:283959 47/102 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 192 1.000 Domainoid score I714
eggNOG 1 0.900 - - E1_COG0481
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6505
Inparanoid 1 1.050 535 1.000 Inparanoid score I209
OMA 1 1.010 - - QHG53758
OrthoFinder 1 1.000 - - FOG0003399
OrthoInspector 1 1.000 - - oto100699
orthoMCL 1 0.900 - - OOG6_100972
Panther 1 1.100 - - LDO PTHR43512
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R536
SonicParanoid 1 1.000 - - X2295
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.