DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13175 and Lto1

DIOPT Version :10

Sequence 1:NP_610740.1 Gene:CG13175 / 3771946 FlyBaseID:FBgn0033693 Length:141 Species:Drosophila melanogaster
Sequence 2:XP_063120222.1 Gene:Lto1 / 309136 RGDID:1304637 Length:208 Species:Rattus norvegicus


Alignment Length:145 Identity:38/145 - (26%)
Similarity:65/145 - (44%) Gaps:22/145 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SRDI-----NDLFDDIVLTEEKEARLGYEEGLKDGQEQGNEEGYKLGYAQGVSLGEELGKILGQV 64
            |||.     .|:||.:|:.:|:....||:||.::|...|..||.:.|...|..:|.|:|...|..
  Rat    60 SRDTAMAMEQDIFDAVVMADERFHGEGYQEGYEEGSSLGIVEGKQYGVLHGAKIGSEIGCYRGFA 124

  Fly    65 VAQQQLKHT-------------DKVRRSLEQLRSLIEEFPRTNDPQADIVGAVQDIRSSHRR--- 113
            :|.:.|.|:             .:..:.:|.|.:|:::||..:.....:...::.||...|:   
  Rat   125 LAWKCLLHSGAGEKESLAPMHLSRKMKVVEALITLLQDFPYDDPTYEKLHEDLERIRGKFRQLCS 189

  Fly   114 -LRAQLGSKKTPGAA 127
             |..|...|.|.|.:
  Rat   190 LLNVQPDFKVTAGGS 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13175NP_610740.1 Yae1_N 26..64 CDD:430844 14/37 (38%)
Lto1XP_063120222.1 None

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