DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and KIP2

DIOPT Version :10

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_015170.1 Gene:KIP2 / 855948 SGDID:S000006076 Length:706 Species:Saccharomyces cerevisiae


Alignment Length:692 Identity:180/692 - (26%)
Similarity:285/692 - (41%) Gaps:199/692 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STKN---ASSIQVCIKVRPCEPG---------------------------LTSLWQVKEGRSIQL 36
            |.||   ..||.|.|:.:|...|                           :...|.:...::|  
Yeast    93 SRKNDTYTGSITVTIRPKPRSVGTSRDHVGLKSPRYSQPRSNSHHGSNTFVRDPWFITNDKTI-- 155

  Fly    37 ADSHAE--PYVFDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQN 99
              .|.|  .:.||:||....:|.||::|.:|.::...:.|.|.||||||.|.||||:||.|:||.
Yeast   156 --VHEEIGEFKFDHVFASHCTNLEVYERTSKPMIDKLLMGFNATIFAYGMTGSGKTFTMSGNEQE 218

  Fly   100 PGVMVLAAKEIFQQISSET---ERDFLLRVGYIEIYNEKIYDLL-------------------NK 142
            .|::.|:...:|..|..::   ::.|.:.:.|:|||||:|||||                   :|
Yeast   219 LGLIPLSVSYLFTNIMEQSMNGDKKFDVIISYLEIYNERIYDLLESGLEESGSRISTPSRLYMSK 283

  Fly   143 KNQ-----DLKIH-ESGNGIVNVNCKESIVTSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIF 201
            .|.     :|||. :|..|:..:...|....|.::|||.:.:|:|.|.:|||:.|.||||||||.
Yeast   284 SNSNGLGVELKIRDDSQYGVKVIGLTERRCESSEELLRWIAVGDKSRKIGETDYNARSSRSHAIV 348

  Fly   202 RIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPADHA--------SSLMIFRNLVKSLS---- 254
            .|.:   .|.:..|.|.:.|.|||.||||||:.......        .||:....::..||    
Yeast   349 LIRL---TSTNVKNGTSRSSTLSLCDLAGSERATGQQERRKEGSFINKSLLALGTVISKLSADKM 410

  Fly   255 ESVDS----------------------KPNS---FRDSKLPRIMLPSLGGNVLTSIICTITP--S 292
            .||.|                      .|::   :|||||.|::.|:|.|:.:.:.|||:..  .
Yeast   411 NSVGSNIPSPSASGSSSSSGNATNNGTSPSNHIPYRDSKLTRLLQPALSGDSIVTTICTVDTRND 475

  Fly   293 FVEESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNESQLVLQELE 357
            ...|:.:|:.|.:.||.:........|.|........||.|.:|:.:|      .|.:.::.||:
Yeast   476 AAAETMNTLRFASRAKNVALHVSKKSIISNGNNDGDKDRTIELLRRQL------EEQRRMISELK 534

  Fly   358 GR--IKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPK 420
            .|  |...:.|..:.::..|           :.|:|::|| |.|||...|...|  ..||.|   
Yeast   535 NRSNIGEPLTKSSNESTYKD-----------IKATGNDGD-PNLALMRAENRVL--KYKLEN--- 582

  Fly   421 PLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDA 485
                           |    ||.|..|.:|...           |.|..::      |.:|    
Yeast   583 ---------------C----EKLLDKDVVDLQD-----------SEIMEIV------EMLP---- 607

  Fly   486 PQTEISALTASN-QVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEEL 549
              .|:..|..:. |..:..|.:|.:..::|::.|..||.....|:                    
Yeast   608 --FEVGTLLETKFQGLESQIRQYRKYTQKLEDKIMALEKSGHTAM-------------------- 650

  Fly   550 LSSISEKDST-IVSLQQSLEELSR--DVLRNSKEDQMRSMCP 588
              |::..|.| ::.||:.||...:  :.|:::|..:.|::.|
Yeast   651 --SLTGCDGTEVIELQKMLERKDKMIEALQSAKRLRDRALKP 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 Motor_domain 8..310 CDD:473979 119/397 (30%)
CCDC158 <505..>729 CDD:464943 17/87 (20%)
SMC_prok_B 622..1285 CDD:274008
SMC_prok_B 1110..1875 CDD:274008
KIP2NP_015170.1 KISc_CENP_E 102..493 CDD:276825 119/397 (30%)
SMC_prok_B <445..>698 CDD:274008 75/333 (23%)
Blue background indicates that the domain is not in the aligned region.

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