DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and KIP2

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_015170.1 Gene:KIP2 / 855948 SGDID:S000006076 Length:706 Species:Saccharomyces cerevisiae


Alignment Length:692 Identity:180/692 - (26%)
Similarity:285/692 - (41%) Gaps:199/692 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STKN---ASSIQVCIKVRPCEPG---------------------------LTSLWQVKEGRSIQL 36
            |.||   ..||.|.|:.:|...|                           :...|.:...::|  
Yeast    93 SRKNDTYTGSITVTIRPKPRSVGTSRDHVGLKSPRYSQPRSNSHHGSNTFVRDPWFITNDKTI-- 155

  Fly    37 ADSHAE--PYVFDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQN 99
              .|.|  .:.||:||....:|.||::|.:|.::...:.|.|.||||||.|.||||:||.|:||.
Yeast   156 --VHEEIGEFKFDHVFASHCTNLEVYERTSKPMIDKLLMGFNATIFAYGMTGSGKTFTMSGNEQE 218

  Fly   100 PGVMVLAAKEIFQQISSET---ERDFLLRVGYIEIYNEKIYDLL-------------------NK 142
            .|::.|:...:|..|..::   ::.|.:.:.|:|||||:|||||                   :|
Yeast   219 LGLIPLSVSYLFTNIMEQSMNGDKKFDVIISYLEIYNERIYDLLESGLEESGSRISTPSRLYMSK 283

  Fly   143 KNQ-----DLKIH-ESGNGIVNVNCKESIVTSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIF 201
            .|.     :|||. :|..|:..:...|....|.::|||.:.:|:|.|.:|||:.|.||||||||.
Yeast   284 SNSNGLGVELKIRDDSQYGVKVIGLTERRCESSEELLRWIAVGDKSRKIGETDYNARSSRSHAIV 348

  Fly   202 RIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPADHA--------SSLMIFRNLVKSLS---- 254
            .|.:   .|.:..|.|.:.|.|||.||||||:.......        .||:....::..||    
Yeast   349 LIRL---TSTNVKNGTSRSSTLSLCDLAGSERATGQQERRKEGSFINKSLLALGTVISKLSADKM 410

  Fly   255 ESVDS----------------------KPNS---FRDSKLPRIMLPSLGGNVLTSIICTITP--S 292
            .||.|                      .|::   :|||||.|::.|:|.|:.:.:.|||:..  .
Yeast   411 NSVGSNIPSPSASGSSSSSGNATNNGTSPSNHIPYRDSKLTRLLQPALSGDSIVTTICTVDTRND 475

  Fly   293 FVEESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNESQLVLQELE 357
            ...|:.:|:.|.:.||.:........|.|........||.|.:|:.:|      .|.:.::.||:
Yeast   476 AAAETMNTLRFASRAKNVALHVSKKSIISNGNNDGDKDRTIELLRRQL------EEQRRMISELK 534

  Fly   358 GR--IKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPK 420
            .|  |...:.|..:.::..|           :.|:|::|| |.|||...|...|  ..||.|   
Yeast   535 NRSNIGEPLTKSSNESTYKD-----------IKATGNDGD-PNLALMRAENRVL--KYKLEN--- 582

  Fly   421 PLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDA 485
                           |    ||.|..|.:|...           |.|..::      |.:|    
Yeast   583 ---------------C----EKLLDKDVVDLQD-----------SEIMEIV------EMLP---- 607

  Fly   486 PQTEISALTASN-QVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEEL 549
              .|:..|..:. |..:..|.:|.:..::|::.|..||.....|:                    
Yeast   608 --FEVGTLLETKFQGLESQIRQYRKYTQKLEDKIMALEKSGHTAM-------------------- 650

  Fly   550 LSSISEKDST-IVSLQQSLEELSR--DVLRNSKEDQMRSMCP 588
              |::..|.| ::.||:.||...:  :.|:::|..:.|::.|
Yeast   651 --SLTGCDGTEVIELQKMLERKDKMIEALQSAKRLRDRALKP 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 119/403 (30%)
Motor_domain 8..310 CDD:277568 119/397 (30%)
SMC_prok_B <471..1270 CDD:274008 23/122 (19%)
Mplasa_alph_rch 924..1647 CDD:275316
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
KIP2NP_015170.1 KISc_CENP_E 102..493 CDD:276825 119/397 (30%)
SMC_prok_B <445..>698 CDD:274008 75/333 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341347
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101662
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.690

Return to query results.
Submit another query.