DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and USO1

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_010225.1 Gene:USO1 / 851501 SGDID:S000002216 Length:1790 Species:Saccharomyces cerevisiae


Alignment Length:1924 Identity:400/1924 - (20%)
Similarity:756/1924 - (39%) Gaps:512/1924 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 NPGVMVLAAKE-IFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIH--------ESGN 154
            :|.|..|.|.| ||:::.|..|.:..||...:      :.|.|:..|..||.:        |:||
Yeast   216 SPHVQKLVAFENIFERLFSIIEEEGGLRGSLV------VNDCLSLINNILKYNTSNQTLFLETGN 274

  Fly   155 GIVNVNCKESIVTSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIFRIIIE--SRKSDHSDNDT 217
                 ..|.:.:.||.....:::..|.:|:|   |:|....    |..:.:|  :..:....|..
Yeast   275 -----LPKLAHLLSEPISQDEVFFWNDQRIV---NINTALD----IVSLTVEPGNTVTTKHQNAL 327

  Fly   218 VKQSVLSLV-DLAGSEQVDPADHASSLMIFRNLVKS-----LSESVDSKPNSFRDSKLPRIMLPS 276
            :..|||.:| .||....:.......:|:...|:|:|     |..|....|  :.|..|| :...:
Yeast   328 LDSSVLMVVLRLAFFHNIPKKVRPVALLTAANMVRSNEHAQLEFSKIDVP--YFDPSLP-VNSTA 389

  Fly   277 LGGNVLTSIICTITPSFVEESSSTISFGT---CAKKIRC---------------KPQVCKIDSET 323
            .||.:....:.:|..:::..::|..:|.|   |::.::.               :.|:|...:..
Yeast   390 NGGPIKLIPVVSILINWMLYANSVHTFDTRVACSRLLKAYFMDNFDLQRDFLLKQVQLCNNSTNN 454

  Fly   324 TMMRQLDRGISMLKDKLAKKKIKNESQLVLQELEGRIKRDMLKIVSS--ASLD------------ 374
            ......:.|.|...||.:... |:.......|.||..|.::.:::.:  |.|:            
Yeast   455 VGDNAKENGGSNKSDKESDSD-KDTDGKDGTEYEGSFKANLFEVLLNYDAELNLNPFKLFFTTDI 518

  Fly   375 -------DYRLQKRRRTWT---LTASGSEGDAPVLALPEPEE----------SRLPRPSKLTNLP 419
                   |::..:..|..|   .|.:..|.:.|:.|:....|          .|:| .|.||.|.
Yeast   519 FMFFFQQDHKYSEELREITRNVTTGNDLEDEEPLKAIQTISELLTTSLTAADIRIP-ISYLTFLI 582

  Fly   420 KPL---FQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVP 481
            ..|   |:........|.:.|:|.....|..:.|.           |...:.::::...|:.|..
Yeast   583 YWLFGDFKATNDFLSDKSVIKSLLSFSYQIQDEDV-----------TIKCLVTMLLGVAYEFSSK 636

  Fly   482 NCDAPQTEISALTASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQME 546
            ....|:                           ||..|.:....||        :.:.::.||.:
Yeast   637 ESPFPR---------------------------KEYFEFITKTLGK--------DNYASRIKQFK 666

  Fly   547 EELLSSISEKDSTIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELERLLPLA 611
            ::  |..|:.|                    ..||.:  :.|||:.                   
Yeast   667 KD--SYFSKVD--------------------MNEDSI--LTPELDE------------------- 688

  Fly   612 SASGLDSV--ACQFDQLRSEIAATRMKLESMLSTFSHASCEVSQKTTDCKRLSEQIS-TAHDDFG 673
              :||..|  :..|.||.:|      .:..:.:..||...|            |.|: .:.::..
Yeast   689 --TGLPKVYFSTYFIQLFNE------NIYRIRTALSHDPDE------------EPINKISFEEVE 733

  Fly   674 QLQEKYNNLKHKWSSQKLAIDTMQVDYNTIQQKYLQLQDEYRHLELRSDEQCQQLQDENSKLQAE 738
            :||.:...||.:.:|  |..:| :..:..:.:|.:.|.:|::.|    ||:.|.|...:|.|:..
Yeast   734 KLQRQCTKLKGEITS--LQTET-ESTHENLTEKLIALTNEHKEL----DEKYQILNSSHSSLKEN 791

  Fly   739 IGTLKERVEEIHSELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTIQ 803
            ...|:..::.:...|.|:    |...|: |:.::.:.:.:.|:::                |||.
Yeast   792 FSILETELKNVRDSLDEM----TQLRDV-LETKDKENQTALLEYK----------------STIH 835

  Fly   804 ECDALREEHKQRTTNSDLESMKSSGVGTECSDPENELDTDLLQQFTKLSKSIQQIELTDYSGGRR 868
                 ::|...:|....||::.|.....|  |..|::..||.    .||:.:|.:|         
Yeast   836 -----KQEDSIKTLEKGLETILSQKKKAE--DGINKMGKDLF----ALSREMQAVE--------- 880

  Fly   869 LFIYNHAEQDQSVPSLKLCLEPAKYLEGDGKQHDAS------DSVFLKGFLKCQRFQIVKINQE- 926
                                |..|.|:   |:.|.|      ::..||..:..:..:|..||:. 
Yeast   881 --------------------ENCKNLQ---KEKDKSNVNHQKETKSLKEDIAAKITEIKAINENL 922

  Fly   927 -------QNLVKEEDRMRDIIFQLKQEVDGKKNLI----EEEKEVINN---LRAQITSLNQIETI 977
                   .||.||::.:...:.:.|.......||:    |:.|.:.||   ::|:..||  |:.:
Yeast   923 EEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESL--IKAV 985

  Fly   978 KNQNAKTKILCEELQTKDTVQTANKQESQ-EVLTLKTSLAHLKSKVCELQKKLEKQSEDEKISEL 1041
            :....::.|....||.|....:..|:..| |..:::.::..||..:.:|:     |:::|.||:.
Yeast   986 EESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLE-----QTKEEIISKS 1045

  Fly  1042 QSDIGEISECCLSMELKLADIVNWQAEELRPLDQLQESGVELQHHSTTAEESLNVEKPIQEQTER 1106
            .|...|.......::.||........|.:..:.:|.::..||       |..|...|.::.:.|.
Yeast  1046 DSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREEL-------EAELAAYKNLKNELET 1103

  Fly  1107 TLTTEYERRIEQLEESLQRAQEELSILEKRKTDENKSLQLEYMAKIETSENENRSKFRAYCLDLK 1171
            .|.|. |:.:::::|:.:..:||...|||..|:..:.|. ...|.:|:.|.|:.        ||.
Yeast  1104 KLETS-EKALKEVKENEEHLKEEKIQLEKEATETKQQLN-SLRANLESLEKEHE--------DLA 1158

  Fly  1172 ETQKRYEEQL----QQTNEKLASVTTQCQVHLDVIKRSLQEKITQAEKERNELAVRHKAELEKIR 1232
            ...|:||||:    :|.||:::               .|.::||..::|.           |.|:
Yeast  1159 AQLKKYEEQIANKERQYNEEIS---------------QLNDEITSTQQEN-----------ESIK 1197

  Fly  1233 ETLKEKESSYKEKLRQAEEERDKEISRLEVMRNTIAELHKTNSDREVEL----EGVKMEKCQLKK 1293
            :...|.|...|.....:||:.:.:.|.::.:...|.||.|.|...|..|    :.|:.|..::|:
Yeast  1198 KKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKE 1262

  Fly  1294 LYD------KSMLELEQLQCTADQKSSDLLPGSSNENIDDLQKKCDQYVQDLELLRGEKAELLSE 1352
            |.|      |.:.|||.....::.|:|..|         :|||:.::..::|:   .:..||..:
Yeast  1263 LQDECNFKEKEVSELEDKLKASEDKNSKYL---------ELQKESEKIKEELD---AKTTELKIQ 1315

  Fly  1353 IQKINGQHSNTIKKLEEIEAEMITLTTQKELERCEIAEKLETFKSKEADIKEALHCAQLRLHAYD 1417
            ::||    :|..|..|:.|:|:..|......||....|:||..|::          .|::..|::
Yeast  1316 LEKI----TNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNE----------IQIKNQAFE 1366

  Fly  1418 KLVCEYERLKGCLSDSNKLSENLQKKVERLHAEQLALQEGISGRDSEIKQLRSELKDAIDENKTV 1482
            |     || |.....|:.:::...:|:..|..|.:.||.....:..||...||||:.....|..:
Yeast  1367 K-----ER-KLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDEL 1425

  Fly  1483 REAKVGLENSLKAVQENMSAQEGQFKQKIA-----------DIKGSVDELQIKLKSLQE----VR 1532
            .|.|   :|::|::|:.:.:    :|.||.           |.|..::.|:.:|::.||    |.
Yeast  1426 LEEK---QNTIKSLQDEILS----YKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVE 1483

  Fly  1533 DHLESRNEELKRKLKDAQELQNMVDK--------ERKLNSS---LREDFDKLEQTKLDLEEQLRA 1586
            :.|:...||..::..:.::.:.|:.|        |.:|.||   :|:..:||||:|...||.::.
Yeast  1484 EGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKN 1548

  Fly  1587 KKVEIDRRSKELGEVTKDCENIRSDL--EAQTNDFLKE-RETLNLTISDLRLHNEQLLETSKNYL 1648
            .:.|.......:.|..||.|.::|.|  ||::...|:. ::.||.....:|::.|:         
Yeast  1549 LQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEE--------- 1604

  Fly  1649 SDITAANNLNLEMKKNLHDLTKECKSLRSDLQSKEEYFQTQKQLLDETISNLKEENRKMEEKLSS 1713
                     |..:|..|.|:.:|.|..:::::|.:|    :|:||   .|.|||    :|::|.|
Yeast  1605 ---------NTVLKSKLEDIERELKDKQAEIKSNQE----EKELL---TSRLKE----LEQELDS 1649

  Fly  1714 GNKALKEDCEKLRSTLESKELILQQNKQELEERLTVINEKNGKNALLDAQLKSNETAFTSL---R 1775
            ..:..::..|:.|:.:..    .|..|.:|:|:..::                 ||.:..|   .
Yeast  1650 TQQKAQKSEEERRAEVRK----FQVEKSQLDEKAMLL-----------------ETKYNDLVNKE 1693

  Fly  1776 KAWIKQSLAIEAANKRSLEMEQKVDKRTREYEELRS-TLKTREINFRSEKERMDGTISSLLEDKR 1839
            :||.:..   :...|.:....|:::|..:|.:.|:: ..|.:|.|                ||:.
Yeast  1694 QAWKRDE---DTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEAN----------------EDRS 1739

  Fly  1840 NLEEKLCTVTELLAKLKRELPALHTQKVNGGDVSIELNS 1878
            .:::.:..||:|     .|..|.:..|:.  |:.:|::|
Yeast  1740 EIDDLMLLVTDL-----DEKNAKYRSKLK--DLGVEISS 1771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 53/251 (21%)
Motor_domain 8..310 CDD:277568 53/230 (23%)
SMC_prok_B <471..1270 CDD:274008 161/827 (19%)
Mplasa_alph_rch 924..1647 CDD:275316 183/781 (23%)
CENP-H 1204..>1266 CDD:283493 12/61 (20%)
CALCOCO1 <1489..1850 CDD:285171 84/393 (21%)
USO1NP_010225.1 Uso1_p115_head 366..715 CDD:398505 73/450 (16%)
M_group_A_cterm 783..>915 CDD:411361 34/195 (17%)
Smc 898..1733 CDD:224117 222/976 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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