DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and AT3G51150

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001190049.1 Gene:AT3G51150 / 824279 AraportID:AT3G51150 Length:1054 Species:Arabidopsis thaliana


Alignment Length:1049 Identity:251/1049 - (23%)
Similarity:418/1049 - (39%) Gaps:293/1049 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STKNASSIQVCIKVRPCEPGLTSLWQVKEGRSIQLAD------------SHAE---------PYV 45
            |:.....|.|.:::||.        .|:|.....:||            ||..         .|.
plant    11 SSGREEKIFVSVRLRPL--------NVRERARNDVADWECINDETVIYRSHLSISERSMYPTAYT 67

  Fly    46 FDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEI 110
            ||.||....|.:||:|:.||.:..:.:.|.:.::||||||||||||||:      |:...|..:|
plant    68 FDRVFGPECSTREVYDQGAKEVALSVVSGVHASVFAYGQTSSGKTYTMI------GITDYALADI 126

  Fly   111 FQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKI-HESGNGIVNVNCKESIVTSEDDLLR 174
            :..|....||:|:|:...:|||||.:.|||:.....|:: .:...|.|.....|..:...:....
plant   127 YDYIEKHNEREFILKFSAMEIYNESVRDLLSTDISPLRVLDDPEKGTVVEKLTEETLRDWNHFKE 191

  Fly   175 QLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDH--SDNDTVKQSVLSLVDLAGSEQVDPA 237
            .|.:...:|.:|||.:||.|||||.|.|:.:||...::  .|..:...:.::.:||||||:...:
plant   192 LLSICIAQRQIGETALNEVSSRSHQILRLTVESTAREYLAKDKFSTLTATVNFIDLAGSERASQS 256

  Fly   238 DHAS-----------SLMIFRNLVKSLSESVDSK-PNSFRDSKLPRIMLPSLGGNVLTSIICTIT 290
            ..|.           ||:....:::.||:..:.. |  ||||||.||:..|||||..||||||::
plant   257 LSAGTRLKEGGHINRSLLTLGTVIRKLSKGKNGHIP--FRDSKLTRILQTSLGGNARTSIICTLS 319

  Fly   291 PS--FVEESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAK----------- 342
            |:  .||:|.:|:.|.:|||::....||..:.|:..::|.|.|.::.|:.:|:.           
plant   320 PARVHVEQSRNTLLFASCAKEVTTNAQVNVVMSDKALVRHLQRELAKLESELSSPRQALVVSDTT 384

  Fly   343 ----------KKIKNESQLVLQELEGRIKR--DMLKIVSSA------SLD------------DYR 377
                      :|:..|...:.||||....|  |:.:|:..|      |.|            .|.
plant   385 ALLKEKDLQIEKLNKEVFQLAQELERAYSRIEDLQQIIGEAPQQEILSTDSEQTNTNVVLGRQYP 449

  Fly   378 LQKRRRTW---TLT-ASGSEGDAPVLALPEPEES------------RL-------------PRPS 413
            ..:.|.:|   .:| .|.....|.::..|:..|.            ||             ..|.
plant   450 KLRVRSSWESLNITPESPLSAQASIMISPQSTEHGSDENVFQLSDLRLNSGASSPAQHLAFVTPG 514

  Fly   414 KLTNLPKPLFQRRGIAPK-----AKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRI------ 467
            |.|   |.....||:..|     .||  :::.:.|:|.:.:..|...::....:|.:.:      
plant   515 KFT---KVRLNIRGVESKNQLHIHKG--ESVDQSRVQGERLHEMDEPSEVDSEDTCTELQCIETE 574

  Fly   468 -PSVMMSKKYQE------------SVPNCD------APQTEISALTASNQVAK-ETIEKYEEQVK 512
             |.::|   |.|            ::|.|:      .|.||    ||..:..| ||.||.||:.:
plant   575 SPGIIM---YPEPNILPDRCKAVSALPLCEPESKNSRPPTE----TAEEKEEKEETEEKEEEEEE 632

  Fly   513 RLKE----TIERLEMENGKAVN-------LGEQF--ETHKAKSKQMEEELLSSISEK-------- 556
            |:||    :|:..|......|:       ..|.|  |:...|.....::.::...||        
plant   633 RVKEVSSVSIQTKEKSGPIKVSPRCVLSLTDESFPDESSNLKRDPTHQDFVTPSPEKLYAWHLES 697

  Fly   557 -----------------DSTIVSLQQSLEELSRDV------LRNSKEDQ----MRSMCPELESSC 594
                             .|.:.|...||.|  ||.      .:|.:.:.    ..|..|.|....
plant   698 NGQTAGGTGFTRSRSCGASFVSSSSFSLSE--RDANTPPCWYQNERAESNLKPSNSKRPPLPKHI 760

  Fly   595 ERICNKCLELER------LLPLASASGLDSV--------ACQFDQLRSEIAATRMKLESMLSTFS 645
            .|:.......|:      .:|    :|||.|        ..|....:|.:.|.:....:::|. .
plant   761 SRMSMPATWFEKDFNHTQRMP----AGLDGVNMIKSSPNGSQVSTSKSHVYARQTSGRALISQ-D 820

  Fly   646 HASCEVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLKHKWSSQKLAIDTMQVDYNT------IQ 704
            .....|.|:.   ||:      .|....::::|:..|:...|.:..|:|.:| ||.|      ::
plant   821 EGEETVPQRD---KRI------IHLSMEEIEQKFLALRSSKSFKDAAVDPIQ-DYLTMPLNWPLE 875

  Fly   705 QKYLQLQ--------------DEYRHLELRSDEQ-CQQLQDENSKLQAEIGTLKERVEEIHSELL 754
            .|.|:::              ..|..|..|.|:: |..::.|..:|:    .::|.... :::.:
plant   876 FKRLEMEIIELWHACNVSLSHRSYFFLLFRGDQKDCLYMEVELRRLK----YIRETFTH-NNKAI 935

  Fly   755 EVPNPDTHPEDMELQNQE-------LKKRLSK-------LQWEFDEIQLNYE----CLSNELMST 801
            |.....|....:...|:|       ::|:|:|       |:|   .|.||.:    .|::.|.|.
plant   936 ENGRTLTSMSSLRALNRERYKLSQLMQKKLTKEERENVFLRW---GIGLNTKHRRLQLAHRLWSE 997

  Fly   802 IQECDALRE 810
            .::.|.:||
plant   998 SKDMDHVRE 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 113/345 (33%)
Motor_domain 8..310 CDD:277568 113/339 (33%)
SMC_prok_B <471..1270 CDD:274008 93/460 (20%)
Mplasa_alph_rch 924..1647 CDD:275316
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
AT3G51150NP_001190049.1 KISc_CENP_E 17..341 CDD:276825 113/339 (33%)
SMC_prok_A <352..>451 CDD:274009 19/98 (19%)
DUF3490 876..1034 CDD:371840 28/139 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47968
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.960

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