DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and TES

DIOPT Version :10

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_189907.2 Gene:TES / 823396 AraportID:AT3G43210 Length:938 Species:Arabidopsis thaliana


Alignment Length:1045 Identity:254/1045 - (24%)
Similarity:428/1045 - (40%) Gaps:228/1045 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRPC---EPGLTSL--WQVKEGRSIQL----ADSHAEPYVFDYVFDEGASNQEVFDRMA 64
            |.|.:::||.   |.....|  |:..:..:|..    .|.....|.||.||:...:.|||::..:
plant    30 ILVTVRMRPLNWREHAKYDLIAWECPDDETIVFKNPNPDKAPTKYSFDKVFEPTCATQEVYEGGS 94

  Fly    65 KHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETERDFLLRVGYI 129
            :.:..:.:.|:|.|||||||||||||:||.      ||.....|:|::.|....||.|:|:|..:
plant    95 RDVALSALAGTNATIFAYGQTSSGKTFTMR------GVTESVVKDIYEHIRKTQERSFVLKVSAL 153

  Fly   130 EIYNEKIYDLLNKKNQDLK-IHESGNGIVNVNCKESIVTSEDDLLRQLYMGNKERVVGETNMNER 193
            |||||.:.||||:....|: :.:...|.:..|..|.:|.|...|...:.:...:|.||||.:|::
plant   154 EIYNETVVDLLNRDTGPLRLLDDPEKGTIVENLVEEVVESRQHLQHLISICEDQRQVGETALNDK 218

  Fly   194 SSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSE----------QVDPADHAS-SLMIFR 247
            |||||.|.|:.|.|...:.:.......:.|:||||||||          ::....|.: ||:...
plant   219 SSRSHQIIRLTIHSSLREIAGCVQSFMATLNLVDLAGSERAFQTNADGLRLKEGSHINRSLLTLT 283

  Fly   248 NLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLTSIICTITP--SFVEESSSTISFGTCAKKI 310
            .:::.||.........:|||||.||:..|||||..|:|||||:|  |.||::..|:||...||::
plant   284 TVIRKLSSGRKRDHVPYRDSKLTRILQNSLGGNARTAIICTISPALSHVEQTKKTLSFAMSAKEV 348

  Fly   311 RCKPQVCKIDSETTMMRQLDRGISMLKDKLAK---------KKIKNESQLVLQELEGRIK----- 361
            ....:|..:.||..:::.|.:.::.|:.:|..         |.:..|.::.:|::|..:|     
plant   349 TNCAKVNMVVSEKKLLKHLQQKVAKLESELRSPEPSSSTCLKSLLIEKEMKIQQMESEMKELKRQ 413

  Fly   362 RDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGD-----APVLALPEPEESRLPRPSKLTNLPKP 421
            ||    ::.:.||..|..|.|:      ..||.:     |..|:....|||   .|||       
plant   414 RD----IAQSELDLERKAKERK------GSSECEPFSQVARCLSYHTKEES---IPSK------- 458

  Fly   422 LFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQ-----ESVP 481
                  ..|.::   :|.:::|  .||:     |......:..:.:..:.:.:|:|     |:..
plant   459 ------SVPSSR---RTARDRR--KDNV-----RQSLTSADPTALVQEIRLLEKHQKKLGEEANQ 507

  Fly   482 NCDAPQTEISALTASNQVAKETIEKYEEQVKRL-KETIERLEMENGKAVNLGEQFETHKAKSKQM 545
            ..|....|:::....:|.|.|.:.|...:::.: |..:...|:..|...||.|:.....::....
plant   508 ALDLIHKEVTSHKLGDQQAAEKVAKMLSEIRDMQKSNLLTEEIVVGDKANLKEEINRLNSQEIAA 572

  Fly   546 EEELLSSISEKDSTIVSLQQSLEELSRDVLRNSKEDQM----RSMCPELESSCERICNKCLELER 606
            .|:.|..:......:||..|: :|.:.|.....|:.::    .|..|.|:......|:.....|.
plant   573 LEKKLECVQNTIDMLVSSFQT-DEQTPDFRTQVKKKRLLPFGLSNSPNLQHMIRGPCSPLSGTEN 636

  Fly   607 LLPLASASGLDSVACQFDQLRSEIAATRMKL-ESMLSTFSHASCEVSQK--TTDCKRLSEQISTA 668
            ..|.::....:|....|       .||..|. ::...|.|.....||::  :.|.||::.....|
plant   637 KDPESNVVSANSAPVSF-------GATPPKRDDNRCRTQSREGTPVSRQANSVDIKRMNRMYKNA 694

  Fly   669 HDDFGQLQEKYNNLKHKWSSQKLAIDTMQVDYNTIQQKYLQLQDEYRHLELRSDEQCQQLQDENS 733
                  .:|...|:|...:..|..:..:|      .||.|.:              ||.|:.|.:
plant   695 ------AEENIRNIKSYVTGLKERVAKLQ------YQKQLLV--------------CQVLELEAN 733

  Fly   734 KLQAEIGTLKERVEEIHSELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNEL 798
                |.|...|......|::           |..|..:|.:|::..| |....|.:.:......|
plant   734 ----ETGAASEYDATDESQM-----------DWPLCFEEQRKQIIML-WHLCHISIIHRTQFYML 782

  Fly   799 MSTIQECDALREEHKQRTTNSDLESMKSSGVGTECSDPENELDTDLLQQFTKLSKSIQQIELTDY 863
            ..                                 .||.:::              ..::||   
plant   783 FK---------------------------------GDPADQI--------------YMEVEL--- 797

  Fly   864 SGGRRL-FIYNH-AEQDQSVPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVK-INQ 925
               ||| ::..| ||...:.|:| |..|||.|:....:.            ||.:|..:.| :|.
plant   798 ---RRLTWLEQHLAELGNASPAL-LGDEPASYVASSIRA------------LKQEREYLAKRVNT 846

  Fly   926 EQNLVKEEDRMRDIIFQLKQEVD--GKKNLIEEEKEVINNLRAQITSLNQIETIKNQNAKTKILC 988
            :  |..||   |:::: ||.:|.  ||    :..::.||.|.....::..:.......||....|
plant   847 K--LGAEE---REMLY-LKWDVPPVGK----QRRQQFINKLWTDPHNMQHVRESAEIVAKLVGFC 901

  Fly   989 EELQT 993
            :..:|
plant   902 DSGET 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 Motor_domain 8..310 CDD:473979 116/323 (36%)
CCDC158 <505..>729 CDD:464943 44/231 (19%)
SMC_prok_B 622..1285 CDD:274008 74/380 (19%)
SMC_prok_B 1110..1875 CDD:274008
TESNP_189907.2 KISc_CENP_E 29..348 CDD:276825 116/323 (36%)
SCP-1 <319..588 CDD:114219 66/304 (22%)
DUF3490 755..919 CDD:463424 44/229 (19%)
Blue background indicates that the domain is not in the aligned region.

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