DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and AT2G21300

DIOPT Version :10

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_179726.2 Gene:AT2G21300 / 816669 AraportID:AT2G21300 Length:862 Species:Arabidopsis thaliana


Alignment Length:834 Identity:201/834 - (24%)
Similarity:348/834 - (41%) Gaps:204/834 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRP---------------CEPGLTSLWQ--VKEGRSIQLADSHAEPYVFDYVFDEGASN 56
            |.|.:::||               |....|.|::  ::||.:...|      |.||.|:......
plant    25 ILVLVRLRPLNEKEILANEAADWECINDTTVLYRNTLREGSTFPSA------YSFDRVYRGECPT 83

  Fly    57 QEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETERD 121
            ::|::...|.:..:.::|.|.:|||||||||||||||      .|:...|..:||..|....:|.
plant    84 RQVYEDGPKEVALSVVKGINSSIFAYGQTSSGKTYTM------SGITEFAVADIFDYIFKHEDRA 142

  Fly   122 FLLRVGYIEIYNEKIYDLLNKKNQDLKIHES-GNGIVNVNCKESIVTSEDDLLRQLYMGNKERVV 185
            |:::...||||||.|.|||:..:..|::.:. ..|.......|..:...:.|...:.:...:|.:
plant   143 FVVKFSAIEIYNEAIRDLLSPDSTPLRLRDDPEKGAAVEKATEETLRDWNHLKELISVCEAQRKI 207

  Fly   186 GETNMNERSSRSHAIFRIIIES--RKSDHSDNDTVKQSVLSLVDLAGSEQVDPADHAS------- 241
            |||::||||||||.|.::.:||  |:....:|.|...:.::.:||||||:...|..|.       
plant   208 GETSLNERSSRSHQIIKLTVESSAREFLGKENSTTLMASVNFIDLAGSERASQALSAGARLKEGC 272

  Fly   242 ----SLMIFRNLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLTSIICTITP--SFVEESSST 300
                ||:....:::.||.......| :|||||.||:.|.||||..|:|:||::|  |.||::.:|
plant   273 HINRSLLTLGTVIRKLSNGRQGHIN-YRDSKLTRILQPCLGGNARTAIVCTLSPARSHVEQTRNT 336

  Fly   301 ISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNES----------QLVLQE 355
            :.|..|||::..|.|:..:.|:..:::||.|.::.|:.:|........|          .|.:|:
plant   337 LLFACCAKEVTTKAQINVVMSDKALVKQLQRELARLESELRNPAPATSSCDCGVTLRKKDLQIQK 401

  Fly   356 LEGRI-----KRDMLKIVSSASLDDY---------------RLQKRRRTWTLTASGSEGDAPVLA 400
            :|.::     :||    ::.:.|:|:               ..:.|...|   ..||..:  :..
plant   402 MEKQLAEMTKQRD----IAQSRLEDFMKMVEHDASSKAGTPHFRNRTNKW---EDGSVSE--ISG 457

  Fly   401 LPEPEESRLPRPSKLTNLPKPLFQRRG-------------IAPKAKG-----ICKTLK------- 440
            :.:|:.:........|    ||...|.             ::|:..|     .||.::       
plant   458 VVDPDRTSFISDGTST----PLSTARAHVRSHSDDDLEEEMSPRHSGDQSEEYCKEVQCIEMEES 518

  Fly   441 ------EKRLQTDNMDTMPGRAKQLGRETAS---RIPSVMMSKKYQE-----------SVPNCDA 485
                  :...:|| .:|:.|...:...||.|   ||||.:.|.:.::           |.|. ||
plant   519 TRDINNDSEERTD-AETLLGHNAEANGETGSAQHRIPSSVRSVRRRKSWSRGDTMTGTSTPP-DA 581

  Fly   486 PQTEISALTASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLG-EQFETHKAKSKQMEEE- 548
            .:|:.......:..|...:| :....|.|:         |....:.| :..|.|...:..:.|| 
plant   582 LETDYRGRPEGHGFAFPDLE-FGSGGKLLR---------NDSMTSRGSDSTEAHSIGTPLVGEEG 636

  Fly   549 ---LLSSISEKDSTIVSLQQSLEELSRDVLRNSKEDQ----MRSMCPELESSCERI------CNK 600
               .:.|..|....:||..::..::.:|:..::.|::    |.:...|.|...|:|      |:.
plant   637 GITSIRSFVEGLKEMVSDPENSGKMRKDIGVDAMEEEVSGTMTNWSEEFERQREQILGLWQTCHV 701

  Fly   601 CL----------------------ELERLLPLASASGLDSVACQFDQLRSEIAATRMKL----ES 639
            .|                      ||.||..:..:....:.|  |::.::...|:.:|.    ..
plant   702 SLVHRTYFFLLFTGDQADSIYIGVELRRLSFMKESFSQGNHA--FERGQTLTIASSLKALHRERR 764

  Fly   640 MLSTFSHASCEVSQKTT--DCKRLSEQISTAHDD-------FGQLQEKYNNLKH 684
            |||..      |.::.|  :.|||.::...|.:.       ..||..|.|::.|
plant   765 MLSKL------VGKRFTGEERKRLYQKFGIAVNSKRRRLQLANQLWSKPNDITH 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 Motor_domain 8..310 CDD:473979 110/333 (33%)
CCDC158 <505..>729 CDD:464943 44/230 (19%)
SMC_prok_B 622..1285 CDD:274008 17/76 (22%)
SMC_prok_B 1110..1875 CDD:274008
AT2G21300NP_179726.2 KISc_CENP_E 24..346 CDD:276825 110/333 (33%)
DUF3490 684..844 CDD:463424 28/137 (20%)
Blue background indicates that the domain is not in the aligned region.

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