DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and Kif18b

DIOPT Version :10

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_932063.2 Gene:Kif18b / 70218 MGIID:2446979 Length:834 Species:Mus musculus


Alignment Length:907 Identity:212/907 - (23%)
Similarity:360/907 - (39%) Gaps:253/907 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPCEPGLTSLWQVKEGRS-----IQLAD----------------------SHAEP- 43
            |.::|.::|||..|        ||..|     ||:.|                      ||..| 
Mouse     8 SVVRVVVRVRPPTP--------KELESQRRPVIQVVDERMLVFDPEECDGGFPGLKWSGSHNGPK 64

  Fly    44 -------YVFDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPG 101
                   :|||.||.|.|:.::||.....:|:.:.:||.|.::||||.|.:|||:||:|.|..||
Mouse    65 KKGKDLTFVFDRVFGEMATQEDVFQHTTHNILDSFLQGYNCSVFAYGATGAGKTHTMLGREGEPG 129

  Fly   102 VMVLAAKEIFQQISS-ETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHES-GNGIVNVNCKES 164
            :|.|...|:::::.: :.|:.|.:.:.|:|:|||:|:|||..|. .|.|.|. ..|:|.......
Mouse   130 IMYLTTMELYRRLEARQEEKQFEVLISYLEVYNEQIHDLLEPKG-PLTIREDPDKGVVVPGLSFH 193

  Fly   165 IVTSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLA 229
            ...|.:.||..|..||..|....|:.|..||||||||:|.::.:.........::.:.:||:|||
Mouse   194 QPASAEQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRVAKMSLIDLA 258

  Fly   230 GSEQVDPADHAS------------SLMIFRNLVKSLSESVDSKPN-SFRDSKLPRIMLPSLGGNV 281
            |||:.. :.||.            ||:...|::.:|:::...|.: .:|||||.|::..|:|||.
Mouse   259 GSERAS-STHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNC 322

  Fly   282 LTSIICTITPSFV--EESSSTISFGTCAKKIR--CKPQVCKIDSE----TTMMRQLDRGISMLKD 338
            .|.:|..|:||.:  |::.:|:.:...||:||  .|..|..:|..    .|:.:||...::.|::
Mouse   323 RTVMIAAISPSSLTYEDTYNTLKYADRAKEIRLTLKSNVISVDHHISQYATICQQLQAEVAFLRE 387

  Fly   339 KLAKKKIKNESQLVLQELEGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPE 403
            ||  :..:..:|.:.|:..                                            |:
Mouse   388 KL--QMYEAGAQALQQQCS--------------------------------------------PQ 406

  Fly   404 PEESRLPRPSKLTNL-PKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRI 467
            |....:|:....::| |.|..|...:...||.  :||:|:.|.:|      .:.:::..|:||..
Mouse   407 PPTLSIPQSLSSSSLQPGPSSQSSTLECHAKN--ETLQEESLGSD------AQGQEIVEESASEQ 463

  Fly   468 PSVMMSK-----KYQESVPNCDAP--------------------------------QTEISALTA 495
            ......|     |.:.::|...:|                                |.:.|.|.|
Mouse   464 EQCPQDKQCPTQKPEPNLPGSPSPSVQAKPGTGQHSPQKQDADHSKQLALQVLRLAQRQYSLLQA 528

  Fly   496 SNQVAKETIEKYEE-QVKRLKETIE-RLEMENGKAVNLGE---QFETHKAKS--------KQMEE 547
            :|.:..:.|.::|. |...|:|::: |.|.....|:..|:   |....::||        :.|.:
Mouse   529 ANLLTPDMISEFETLQQLVLEESVDHRAESPRSPALARGDPLAQALCSESKSSGYCGPVTRTMAK 593

  Fly   548 EL----------LSSISEKDSTIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCER----IC 598
            :|          |:.....|.|   .|:..:|..|.:   :.|:......|.||...:|    .|
Mouse   594 QLNGLTHTLGAPLAPDCTSDKT---FQKPTKEKKRKL---TPEEPGSLPAPNLEMKRQRQSFLPC 652

  Fly   599 NKCLELERLLPL----------ASASGLDSVACQFDQLRSEIAATRMKLESMLSTFSHASCEVSQ 653
            .:...|.:..|.          ||:....|..|....::|.:....       |...:.|..::.
Mouse   653 LRRGSLPKAQPCSEPRTPKRERASSPSPSSRVCPATVIKSRVPLGP-------SALQNCSTPLAL 710

  Fly   654 KTTDCK---RLSEQISTAHDDFGQLQEKYNNLKHKWSSQKLAIDTMQVDYNTIQQKYLQLQDEYR 715
            .|.|..   .:||: |.:...|.:..:        |       :.:..:.|:..|.:|.....:.
Mouse   711 PTRDLNTTFNVSEE-SPSKPSFQEFVD--------W-------EKVSPELNSTDQPFLPSAPVFI 759

  Fly   716 HLELRSDEQCQQLQDENSKLQAEIGTLKER------------VEEIHSELLEVPN-PDTHPE 764
            ..:.|           ...|.|...:.|.|            :..:||..|:.|| |.|.||
Mouse   760 FTKGR-----------KPSLPAVTASKKRRTMRPSVSRGRSCIARLHSSTLKKPNRPFTVPE 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 Motor_domain 8..310 CDD:473979 113/353 (32%)
CCDC158 <505..>729 CDD:464943 45/263 (17%)
SMC_prok_B 622..1285 CDD:274008 27/159 (17%)
SMC_prok_B 1110..1875 CDD:274008
Kif18bNP_932063.2 KISc_KIP3_like 18..353 CDD:276821 110/344 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..508 22/159 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..642 9/45 (20%)
Nuclear localization signal. /evidence=ECO:0000250 619..627 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..686 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 800..834 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.