DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and Klp54D

DIOPT Version :10

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster


Alignment Length:637 Identity:166/637 - (26%)
Similarity:280/637 - (43%) Gaps:135/637 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIQVCIKVRPCE--------------PGLTSLWQVKEGRSIQLADSH----AEPYVFDYVFDEGA 54
            :|.|.::|||..              ||...:  :.||..:....||    ...:.::.||:.||
  Fly   166 NINVVVRVRPLNDKEKRDRHGSTLQFPGNGQV--ILEGNDVGQKRSHNRDSVRVFTYNVVFEPGA 228

  Fly    55 SNQEVFDRMA-KHIVHACMQGSNGTIFAYGQTSSGKTYTMMG------DEQNP-----GVMVLAA 107
            :.:::.|... |.|:...::|.:.|.|.||||.||||:|:.|      .:.||     |::..:.
  Fly   229 TQEDILDYSGIKRIIEMGIEGFSCTAFCYGQTGSGKTHTLTGPPDLFVGKPNPKDPRHGLIFRSF 293

  Fly   108 KEIFQQISSETERDFLLRVGYIEIYNEKIYDLLN----KKNQDLKIHESGNG-----IVNVNCKE 163
            ..:||.|.:..:.:::|:..::|||||::.||||    :|...::..:...|     :..|:|:|
  Fly   294 LYLFQLIKNRKDVNYVLKASFMEIYNERVIDLLNPGSARKPLAVRWSKKSGGFFVENLFTVDCEE 358

  Fly   164 SIVTSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDL 228
            .     ||||..|..|.:.|.||...||:.|||||.|..:.|.|.:.........|...::.|||
  Fly   359 L-----DDLLAVLEEGMRNRAVGSHAMNDHSSRSHTILTVHILSDQQTDGGVFLSKHGKINFVDL 418

  Fly   229 AGSE----------QVDPADHAS-SLMIFRNLVKSLSESVDSKPNS----FRDSKLPRIMLPSLG 278
            ||||          .::.|::.: |||:....:.|||   |||..:    :|||:|.:::..||.
  Fly   419 AGSELTKKTMSEGKTLEEANNINKSLMVLGYCISSLS---DSKKRTGHIPYRDSQLTKLLADSLA 480

  Fly   279 GNVLTSIICTITPSFVE--ESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLA 341
            ||.:|.:|..::|:...  |:.:|:.:.:.||:||.|| |.|:|....::..|.|.|..|  ::.
  Fly   481 GNGVTLMIACVSPAHYNHAETLNTLRYASRAKRIRTKP-VIKMDPREALILSLKRDIHAL--QME 542

  Fly   342 KKKIKNESQLVLQEL-EGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPE 405
            ...:|....|..|.. .|....::|::                  .|....|.|..||   |:.:
  Fly   543 NDHLKAALNLHHQAAPNGGPVENLLEL------------------QLDRVSSGGGVPV---PKVD 586

  Fly   406 ESRLPR--PSKLTNLPK--------------PLFQ-RRGIAPKAKGICKTLKE--KRLQTDN--- 448
            ..|||.  .|:|..|.|              .||. |..|....:.:|:..:.  |:|:..|   
  Fly   587 LQRLPELDGSELAELVKLYMVENESLRQENNHLFTVRETILRDQEIVCRENERLLKKLEDVNKVC 651

  Fly   449 -----MDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDAPQTEISALTASNQVAKETIEKYE 508
                 :...|..:...|:||..  ..:..:.:..:|.|..|.|..:..:..|:.:.  :|.:|..
  Fly   652 VRSPLIPARPAISPTTGKETPG--TEIWTNPEPLQSPPGPDLPIEQRMSENANRRT--DTAQKRI 712

  Fly   509 EQVKRLKETIERLEMENG---------KAVNLGEQFETHKAKSKQMEEELLS 551
            :| ||:.:.|  |.|.|.         |.:||..: |.|..:|.:...::|:
  Fly   713 DQ-KRIAKNI--LIMANAFRKPDSDITKELNLNPE-EAHAKQSTEFMPDMLT 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 Motor_domain 8..310 CDD:473979 104/357 (29%)
CCDC158 <505..>729 CDD:464943 15/56 (27%)
SMC_prok_B 622..1285 CDD:274008
SMC_prok_B 1110..1875 CDD:274008
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 108/364 (30%)
Blue background indicates that the domain is not in the aligned region.

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