DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and kif18a

DIOPT Version :10

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_956533.1 Gene:kif18a / 393209 ZFINID:ZDB-GENE-040426-862 Length:895 Species:Danio rerio


Alignment Length:852 Identity:214/852 - (25%)
Similarity:356/852 - (41%) Gaps:225/852 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPCEPGLTSLWQVKEG---RSIQLADSHA---EP---------------------- 43
            |.::|.::|||...      :.|:|   :.:.:.|:|.   :|                      
Zfish     8 SHVKVVVRVRPLND------KEKDGNFKKVVHVVDNHMLVFDPKEEEVTFFRGQRVGNRDVRKRA 66

  Fly    44 -----YVFDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVM 103
                 :|||.||.|.:|..|||:...|.||...:.|.|.|:||||.|.:|||:||:|...:||||
Zfish    67 NKDLKFVFDSVFGEESSQIEVFENTTKAIVDGVLNGYNCTVFAYGATGAGKTHTMLGTSNSPGVM 131

  Fly   104 VLAAKEIFQQIS-SETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESG-NGIVNVNCKESIV 166
            .|..||:|.::. .:.::.|.:...|:|:|||:|.|||.... .|.:.|.| ||:|.........
Zfish   132 FLTMKELFARMDLIKEDKVFNVAFSYLEVYNEQIRDLLTNSG-PLAVREDGSNGVVVQGLTLHQP 195

  Fly   167 TSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGS 231
            .|.:.:|..|..||:.|....|:||..||||||:|:|.:..:....|.|..|:.:.:||:|||||
Zfish   196 KSAEHILEALDYGNRNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASLNPNVRVAKMSLIDLAGS 260

  Fly   232 EQV-----------DPADHASSLMIFRNLVKSLSESVDSKPN-SFRDSKLPRIMLPSLGGNVLTS 284
            |:.           :.|:...||:...|::.:|:.....|.: .:|||||.|::..|||||..|.
Zfish   261 ERASATNTKGARLREGANINRSLLALGNVINTLANPKCKKTHIPYRDSKLTRLLKDSLGGNCRTV 325

  Fly   285 IICTITPSFV--EESSSTISFGTCAKKIR--CKPQVCKIDSE----TTMMRQLDRGISMLKDKLA 341
            :|..::||.:  |::.:|:.:...||:|:  .:..|..:||.    ..:..:....|.|||.|  
Zfish   326 MIANVSPSSLSYEDTHNTLKYANRAKEIKSTLRSNVMSLDSHIGQYAIICEKQKAEIVMLKQK-- 388

  Fly   342 KKKIKNESQLVLQELEGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEE 406
                       |:|.|.|       ...:.:|:...:|||...                      
Zfish   389 -----------LKEYEER-------KAEAPALNPISIQKRAEF---------------------- 413

  Fly   407 SRLPRPSKLTNLPKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVM 471
                  .|::...:.:|..|               .:|:.:::|.    .|||..   ||:....
Zfish   414 ------EKMSESLRSVFSDR---------------LKLRKEHLDI----EKQLNE---SRLTMRH 450

  Fly   472 MSKKYQESVPNCDAPQTEISALTASNQVAKETIEKYEEQVKRLKETIERLE---MENGKAVN--- 530
            ....:|:|:           .....|:..:.|. |||.::..||...|.|:   ||:.|...   
Zfish   451 RESWHQQSL-----------IFFPDNKAERATC-KYERKLASLKSHQEHLQQRLMESEKCFQENE 503

  Fly   531 ------------LGEQFETHKAKSKQME-EELLSSISEKDSTIVSLQQSLEELSRDV-LRNSKED 581
                        ||....|.:...|::: .:|...||:       |||.:|.:|..: :::.:..
Zfish   504 GWLHRIENEMKLLGHDGHTPEELKKELQCHQLQLQISD-------LQQHMEHMSHLISVQDQENT 561

  Fly   582 QMRSMCPELESSCER--ICNKCL----------ELERLLPLASASGLDSVACQFDQLRSE----- 629
            ....:...|.|:|.|  :..|.:          |||||:....|      ....||.::|     
Zfish   562 HTHKLVNALLSTCRRQHLALKAMSADGDGSEWEELERLVHRERA------VVWADQEKAEDKRDD 620

  Fly   630 --IAATRMKLESMLSTFSHASCEVSQKTTDC------KRLSEQISTAHD--DFG---QLQEKYNN 681
              |.:|.::   .:.:|||.   ||.::|.|      :|.|:::...|.  |.|   |:.|....
Zfish   621 SGIGSTHLR---PILSFSHL---VSHQSTPCSSEKHTRRTSQRLRPTHSSKDCGPHHQVAEAEGV 679

  Fly   682 LKHKWSSQKLAIDTMQVDYN--TIQQKYLQLQDEYRH-----LELRSDEQ--CQQLQDENSKLQA 737
            || |...:||::...::|.:  .:......|||..|.     |:...:.|  ...:.|.||.:  
Zfish   680 LK-KPIRRKLSVSPAKLDGDGPVLSHHPPDLQDVLRQEGMFPLQFTPEGQPHTSSIFDPNSTI-- 741

  Fly   738 EIGTLKE 744
            :||.:::
Zfish   742 DIGHIED 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 Motor_domain 8..310 CDD:473979 113/350 (32%)
CCDC158 <505..>729 CDD:464943 64/282 (23%)
SMC_prok_B 622..1285 CDD:274008 36/150 (24%)
SMC_prok_B 1110..1875 CDD:274008
kif18aNP_956533.1 KISc_KIP3_like 9..353 CDD:276821 113/350 (32%)
SMC_N <345..572 CDD:481474 56/315 (18%)
Blue background indicates that the domain is not in the aligned region.

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