DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and cos

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001260765.1 Gene:cos / 35653 FlyBaseID:FBgn0000352 Length:1201 Species:Drosophila melanogaster


Alignment Length:1271 Identity:230/1271 - (18%)
Similarity:440/1271 - (34%) Gaps:425/1271 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SHAEPYVFDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNP--- 100
            :||.|        ..:|.::|:.:....::...::|.:.::..|||...||:||:.|:.|:|   
  Fly   139 THALP--------SSSSQEQVYHQTVFPLITLFLEGFDASVVTYGQRGQGKSYTLYGNVQDPTLT 195

  Fly   101 ----GVMVLAAKEIFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNVNC 161
                ||:.|..::||..||...||.:.:.||::||....:.|||              |:.|::|
  Fly   196 DSTEGVVQLCVRDIFSHISLHPERTYAINVGFVEICGGDVCDLL--------------GMGNIHC 246

  Fly   162 KESIVTSEDDLLRQLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLV 226
                 |:.|.:...|.:|...|         :|..:|.:|.:.:|.:..........:.|..|..
  Fly   247 -----TNVDAVFHWLQVGLSAR---------QSLPAHTLFTLTLEQQWVSKEGLLQHRLSTASFS 297

  Fly   227 DLAGSEQVD------PADHASSLMIFRNLVKSLSESVDSKPN---------SFRDSKLPRIMLPS 276
            ||.|:|:..      |.|  :.|.:...::.:|::     |.         .:..:.|..::..|
  Fly   298 DLCGTERCGDQPPGRPLD--AGLCMLEQVISTLTD-----PGLMYGVNGNIPYGQTTLTTLLKDS 355

  Fly   277 LGGNVLTSIICTITP--SFVEESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDK 339
            .||...|.:|..::|  ..:.|:...:.|   |.|::|                       :::.
  Fly   356 FGGRAQTLVILCVSPLEEHLPETLGNLQF---AFKVQC-----------------------VRNF 394

  Fly   340 LAKKKIKNESQLVLQELEGRIKRDMLKIVSSASL-------DDYRLQKRRRTWTLTASGSEG--- 394
            :......:::.:::|..|     .:.:..|||..       |::.||.....|:...:.:||   
  Fly   395 VIMNTYSDDNTMIVQPAE-----PVPESNSSAGPLSQAGPGDNFGLQFAASQWSKLVTNAEGLFS 454

  Fly   395 ---DAPVLALPEPEESRLPRPSKLTNLPKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRA 456
               |:.::...|.|:           :.:.||                                 
  Fly   455 KLIDSKLITEVEKEQ-----------IEEWLF--------------------------------- 475

  Fly   457 KQLGRETASRIPSVMMSKKYQESVPNCDAPQTEISALTASNQVAKETIEKYEEQVKRLKETIERL 521
              |.:|....:.|....::.::.||..:|.:.|.....|:|.                       
  Fly   476 --LKQECEECLSSTEAMRQQKQLVPILEAEEPEDVNSEAANS----------------------- 515

  Fly   522 EMENGKAVNLGEQFETHKAKSKQMEEELLSSISEKDSTIVSLQQSLEELSR--DVLRNSKEDQMR 584
            |..|....|..:. |:|:.......|.|:....:|...:: |::..|.||:  ..:..|::.::.
  Fly   516 ESPNSDNENDTDN-ESHRPDLDDKIESLMEEFRDKTDALI-LEKHAEYLSKHPKAVMQSQDREIE 578

  Fly   585 SMCPELESSCERICNKCLELERLLPLASASGLDSVACQFDQLRSEIAATRMKLESMLSTFSHASC 649
            :..|| |:..:|..:.......:.|.||.|..:  ....:::.|:.....:..||::.....:|.
  Fly   579 AQPPE-ENGDDRKVSIGSRRRSVQPGASLSTAE--LAMLNRVASQQPPPPIDPESVVDPLESSSG 640

  Fly   650 EVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLKHKWSSQKLAIDTMQVDYNTIQQKYLQLQDEY 714
            |..::..    |:...:||..:                                     |||.:.
  Fly   641 EGIRQAA----LAAAAATAPIE-------------------------------------QLQKKL 664

  Fly   715 RHLELRSDEQCQQLQDENSKLQAEIGTLKERVEEIHSELLEVPNPDTHPEDMELQNQELKKRLSK 779
            |.|....:.:.:||::....:|.:        :.|.:||  |.|.||...    ..|...|:.:|
  Fly   665 RKLVAEIEGKQRQLREIEETIQVK--------QNIIAEL--VKNSDTRSH----AKQRFHKKRAK 715

  Fly   780 LQWEFDEI--QLNYECLSNELMSTIQECDALREEHKQRTTNSDLESMK----SSGVGTECSDPEN 838
            |:.|.|:.  ||....:.....|.|:....:....::|.  .||.|||    .||          
  Fly   716 LEAECDKAKKQLGKALVQGRDQSEIERWTTIIGHLERRL--EDLSSMKHIAGESG---------- 768

  Fly   839 ELDTDLLQQFTKLSKSIQQIELTDYSGGRRLFIYNHAEQDQSVPSLKLCLEPAKYLEGDGKQHDA 903
                   |:..||.:|:.:                         |.|...:..|.|..:.|    
  Fly   769 -------QKVKKLQQSVGE-------------------------SRKQADDLQKKLRKECK---- 797

  Fly   904 SDSVFLKGFLKCQRFQIVKINQEQNLVKEEDRMRDIIFQLKQEVDGKKNLI------EEEKEVIN 962
                     |:||        .|..|.|           |::..:..|.|:      |::...:.
  Fly   798 ---------LRCQ--------MEAELAK-----------LRESRETGKELVKAQGSPEQQGRQLK 834

  Fly   963 NLRAQITSLNQIETIKNQNAKTKILCEELQTKDTVQTANKQESQEVLTLKTSLAHLKSKVCELQK 1027
            .::|:||.||.|...|:.|.:.:...|:.:|.          ..|:..|:.:...|..:.|.|.:
  Fly   835 AVQARITHLNHILREKSDNLEEQPGPEQQETL----------RHEIRNLRGTRDLLLEERCHLDR 889

  Fly  1028 KLEK-----QSEDEKISELQSDIGEISECCLSMELKLADIVNWQAEELRPLDQLQESGVELQHHS 1087
            ||::     |.|:.|:.|....|..|                             ::.:|.::..
  Fly   890 KLKRDKVLTQKEERKLLECDEAIEAI-----------------------------DAAIEFKNEM 925

  Fly  1088 TTAEESLNVEKPIQEQTERTLTTEYERRIEQLEESLQRAQEELSILEKRKTDENKSLQLEYMAKI 1152
            .|...|::....||.              |:.|:.|      ::.|.:..|:|.::|..:|..|:
  Fly   926 ITGHRSIDTSDRIQR--------------EKGEQML------MARLNRLSTEEMRTLLYKYFTKV 970

  Fly  1153 ETSENENRSKFRAYCLDLKETQKRYEEQLQQTNEKLASVTTQCQVHLDVIKRSLQEKITQA--EK 1215
                           :||:::.::.|.||.|...:..:...:        :|.|...:.||  |.
  Fly   971 ---------------IDLRDSSRKLELQLVQLERERDAWEWK--------ERVLSNAVRQARLEG 1012

  Fly  1216 ERNELAVRHKAE------LEKIRETLKEKESSYKEK 1245
            |||.:.::.:.|      |..:.|......:||.|:
  Fly  1013 ERNAVLLQRQHEMKLTLMLRHMAEETSASSASYGER 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 67/300 (22%)
Motor_domain 8..310 CDD:277568 65/294 (22%)
SMC_prok_B <471..1270 CDD:274008 144/802 (18%)
Mplasa_alph_rch 924..1647 CDD:275316 64/341 (19%)
CENP-H 1204..>1266 CDD:283493 14/50 (28%)
CALCOCO1 <1489..1850 CDD:285171
cosNP_001260765.1 Motor_domain 132..389 CDD:277568 66/295 (22%)
SPEC 657..856 CDD:295325 60/325 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437875
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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