DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and CG5004

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_573195.1 Gene:CG5004 / 32698 FlyBaseID:FBgn0260748 Length:1247 Species:Drosophila melanogaster


Alignment Length:1089 Identity:196/1089 - (17%)
Similarity:370/1089 - (33%) Gaps:334/1089 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 AKEIFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNVNCKESIVTSEDD 171
            |.|:.|.:..|:..:.::.    .|.|...|:|     :..|:..|....||:..|        |
  Fly   145 AHELSQSLELESFYESIIN----PINNPSTYEL-----ECPKVFSSDLVTVNMPAK--------D 192

  Fly   172 LLRQLYMGNKERVVGETNMNERSSRSH------------------AIFRIIIESRKSDHSDNDTV 218
            :|.|.| .:..|.:.|.:.||:...:.                  ||::   |..:..|      
  Fly   193 VLGQKY-ASFARNLAENHRNEKQLNNQYAKGVGSNGGYWNVPSNAAIYK---EQHQQQH------ 247

  Fly   219 KQSVLSLVDLAGSEQVDPADHASSLMIFRNLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLT 283
            :|:...|:....:::.|....|..|.|:.  :..::..:::.|.:..:|        ..||....
  Fly   248 QQAPQDLLTKVNNDRYDRYPKAGGLQIYS--MNGVNSDINNGPATGNNS--------GTGGGAEL 302

  Fly   284 SIICTITPSFVEESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNE 348
            ..:..|...:.:.::|             .|....:.|.:          |:....:.:.:||. 
  Fly   303 EDMLKICTEYADRNNS-------------MPSTHNVSSTS----------SITSSPIVQNRIKT- 343

  Fly   349 SQLVLQELEGRIKRDMLK--------IVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPE 405
                    .|.:.||..|        :.|||::.             ..|.|.|         .|
  Fly   344 --------NGSLPRDKNKSPFPQQAGVASSANIS-------------LLSSSSG---------YE 378

  Fly   406 ESRLPRPSKL-----TNLPKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETAS 465
            ..||..|:::     .::|    ...|....:.|:....           ..|..|.:...|..:
  Fly   379 NVRLLGPNRVEINGQIHVP----ASAGDGGSSSGVSSNA-----------LAPTAAVRASHENLN 428

  Fly   466 RIPSVMMSKKYQESVP------NCDAPQTEIS-----ALTAS-NQVAKETIEKYEEQV---KRLK 515
            :..|.....||....|      ||.:|:.::|     ||..| ..:|...:....:.:   ..:|
  Fly   429 QNHSATTGGKYVPQSPRTKIRTNCMSPKKDVSFGNAFALAISPPPLASSAVVSTSKPIPIPSMVK 493

  Fly   516 ETIERLEMENGKAVNLGEQFETHKAKSKQMEEELLSSISEKDSTIVSLQ-QSLEELSRDVLRNSK 579
            ..:........:..:..:.|::.:.|.:|::..:.:..|.|:...::|. ||:|..::....:.|
  Fly   494 PPLAPKPPAPNQQRDYEQLFKSFERKQQQLDRMVPAKRSNKNINNLTLNLQSVESQTQSPKPSRK 558

  Fly   580 ----------EDQMRSMCPELESSCERICNKCLELERLLPLASASGLDSVACQFDQLRSEIAATR 634
                      |.:.|....:.....:|      ||..|.|.|...||:...  .:|..:..|:.|
  Fly   559 PAPAPRSIHLEQRQRRELIQRRKQLKR------ELAELPPSAGIEGLELKL--GEQPLAPSASPR 615

  Fly   635 MKLESMLSTFSHASCE-----VSQKTTDCKRLSEQISTAHDDF----GQLQEKYNNLKHKWSSQK 690
            ::|:::.:.......:     |.::....| |.:.|....|..    ..|::|.||...|...| 
  Fly   616 LQLQALQNRVCRLEAQRNATRVMEENQQAK-LKQSIEIKQDQLKKLRAMLKQKPNNACLKEELQ- 678

  Fly   691 LAIDTMQVDYNTIQQ---KYLQLQDEYR--HLELRSDEQCQQLQDENSKLQAEIGTLKERVEEIH 750
            |..::::.|..|.:.   :|.:.:.|:.  |.|.:..||...|:.|.:.|:.:||..:|.     
  Fly   679 LVCESLESDRKTFEDLEFQYFEEESEHHASHEEFKRQEQRLMLEAELAALRIQIGPDEEE----- 738

  Fly   751 SELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTIQECDALREEHKQR 815
                  |...|.|                                                   .
  Fly   739 ------PGSPTSP---------------------------------------------------G 746

  Fly   816 TTNSDLES--MKSSGVGT-ECSDPENELDTDLLQQFTKLSKSIQQIELTDYSGGRRLFIYNH-AE 876
            :|.|:|.:  |..|..|: |...|:.....||      :|||:.:          .:| ||| .|
  Fly   747 STGSNLVNGVMSQSLFGSAELLCPKRRNQEDL------MSKSVNE----------NMF-YNHKIE 794

  Fly   877 QDQSVPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVKINQEQNLVKEEDRMRDIIF 941
            .:.|.|. :|.|:..:.|.| |.....|.::.|:|    .||::..:  |:.:..::|       
  Fly   795 ANTSTPK-RLPLQLFEDLAG-GSCEQISFNLSLQG----DRFEVNPL--ERRVPSQDD------- 844

  Fly   942 QLKQEVDGKKNLIEEEKEVINNLRAQITSLNQIETIKNQNAKTKILCEELQTKDTVQTANKQESQ 1006
                        |:...:|.|:  |.|::        :|.|.|||....::.:...:....|:..
  Fly   845 ------------IDRSCKVAND--APISA--------SQGASTKIFDSIMEIERNRKLLLAQQGH 887

  Fly  1007 EVLTLKTSLAHLKSKVCELQKK----------LEKQSEDEKISELQSDIGEISECCLSMELKLAD 1061
            :|      :.|.:.|:.:|:||          |..|...|:..:|:||...      ..:.||  
  Fly   888 QV------IEHERQKMYDLKKKSHDEARTQYLLSTQQSMEQQRQLESDANG------GKDAKL-- 938

  Fly  1062 IVNWQAEELRPLDQLQESGVELQHHSTTAEESLNVEKPIQEQTERTLTT 1110
               ::..||:.|:|.....|:.|......::..||:......:..|.||
  Fly   939 ---FEKTELQKLNQKPGEPVDDQVQKIAGDKENNVQNRKSTGSSPTTTT 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 38/226 (17%)
Motor_domain 8..310 CDD:277568 37/220 (17%)
SMC_prok_B <471..1270 CDD:274008 133/694 (19%)
Mplasa_alph_rch 924..1647 CDD:275316 38/197 (19%)
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
CG5004NP_573195.1 FHA 41..104 CDD:278899
PH-like 1142..1242 CDD:302622
PH 1143..1237 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437961
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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