DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and Kif6

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_796026.2 Gene:Kif6 / 319991 MGIID:1098238 Length:802 Species:Mus musculus


Alignment Length:963 Identity:218/963 - (22%)
Similarity:389/963 - (40%) Gaps:285/963 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIQVCIKVRPC----EPGLTSLWQ-VKEGRSIQ------LAD----SHAEPYVFDY--VFDEGAS 55
            :||:..:|:|.    :.|:.|:.: .|...|::      |||    :..|.|.|.:  :||:.|.
Mouse     5 TIQIFARVKPTVRKQQQGIYSIDEDEKLTHSLEIVLPRDLADGFVNNKRESYKFKFQRIFDQEAK 69

  Fly    56 NQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQ---NPGVMVLAAKEIFQQISSE 117
            .:.:|:.:||.:..:.:.|.||||||||||.||||:|:.|..:   :.|::......||:|:..:
Mouse    70 QEIIFEIIAKPVAESTLAGYNGTIFAYGQTGSGKTFTITGGAERYSDRGIIPRTLSYIFEQLQKD 134

  Fly   118 TERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIV------NVNCKESIV---TSEDDLL 173
            :.:.:...:.|:|||||..||||:.:::..|:.:.....:      |::.|...:   |:|::.|
Mouse   135 SSKIYTTHISYLEIYNECGYDLLDPRHEASKLEDLPKVTILEDPDQNIHLKNLSLHQATTEEEAL 199

  Fly   174 RQLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPAD 238
            ..|::|:..|::.||.||:.|:|||.||.:.:.|::...:   ||:.:.|.||||||||:|....
Mouse   200 NLLFLGDTNRMIAETPMNQASTRSHCIFTVHLSSKEPGSA---TVRHAKLHLVDLAGSERVSKTG 261

  Fly   239 HAS-----------SLMIFRNLVKSLSESVDSKPNS---FRDSKLPRIMLPSLGGNVLTSIICTI 289
            ...           ||.....::.:|||    |..:   :|:|.:..::..|||||.:|::|.|:
Mouse   262 VGGLLLTEAKYINLSLHYLEQVIIALSE----KHRTHIPYRNSMMTSVLRDSLGGNCMTTMIATL 322

  Fly   290 T--PSFVEESSSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNESQLV 352
            :  ...::||.||..|   |:::..                                ||||: ::
Mouse   323 SLEKRNIDESISTCRF---AQRVAL--------------------------------IKNEA-IL 351

  Fly   353 LQELEGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTN 417
            .:|::.|     |.||        ||||.........:.:.|:....||.|.|..:|        
Mouse   352 NEEIDPR-----LMIV--------RLQKEIEDLKAELAMATGEQRTEALTEAELLQL-------- 395

  Fly   418 LPKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETAS------RIPSVMMSKKY 476
                                   ||.:.:...|..|....::|.:...      ....::..||.
Mouse   396 -----------------------EKLIASYLEDQDPESRLEVGADMRKIHHCFHHFKKLLNDKKT 437

  Fly   477 QESVPNCDAPQTEISALTASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAK 541
            .|:..:.:          ::.|..:|.:.  :|:..:|...:::.:.|....||:      .|.:
Mouse   438 LENTVSSE----------STRQACQEPLR--DEEYTKLLGLLKQRDNEINILVNM------LKKE 484

  Fly   542 SKQMEEELLSSISEKDSTIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELER 606
            .|:.::.|.:|..||..|                |..:.....:..|.:..:             
Mouse   485 KKKTQDALQNSSLEKSDT----------------RPPQNSPFIAGSPAVPRT------------- 520

  Fly   607 LLPLASASG--LDSVACQFDQ--------LRSEIAATRMKLESMLSTFSHASC--------EVSQ 653
              |.:||..  .|...|:...        :|.|::..|.:...:... .||..        .:.|
Mouse   521 --PFSSAPSHTQDLSICRHRSSLLHKKTGMREEMSLGRQEAFEIFKR-DHADSVTIEDNKQVLKQ 582

  Fly   654 KTTDCKRLSEQISTAHDDFGQLQEKYNNLKHKWSSQKLAIDTMQVDYNTI-------QQKYL--Q 709
            :.::.|.|.|.|:.|....|||::..|. :|   .|::|:.   :..||:       |::.|  |
Mouse   583 RFSEAKALGESINEARSKIGQLKDAINQ-RH---LQQVALG---ISENTVPASTPDPQEEKLRAQ 640

  Fly   710 LQDE---YR--------------HLELRSDEQCQQLQDENSKLQAEIGTLKERVEEIHSELLEVP 757
            |::|   |:              ||:|..|:...:||.|.....||..|           .|:|.
Mouse   641 LEEEKGRYKTAFMHLKALKVEIEHLQLLMDKAKVKLQKEFEAWWAEEAT-----------SLQVN 694

  Fly   758 NPDTHPED------MELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTIQECDALREEHKQRT 816
            :|.|:.:|      .:.|.|.|.|:.|:        .|..|..:..|    :.||    .:.:|.
Mouse   695 SPATNLQDAVKPFPQQDQAQLLSKKSSR--------DLEVENGAGRL----EVCD----RNARRI 743

  Fly   817 TNS---DLESMKSSGVGTECSD---------PENELDTDLLQQFTKLSKSIQQ 857
            ..|   :.:|.:.||......|         .:::.|:|:| .|.|..:||.|
Mouse   744 LPSPCPNQQSQEPSGSRVLVQDRPLSSIPLTGDSQTDSDIL-AFIKARQSILQ 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 105/352 (30%)
Motor_domain 8..310 CDD:277568 105/346 (30%)
SMC_prok_B <471..1270 CDD:274008 89/449 (20%)
Mplasa_alph_rch 924..1647 CDD:275316
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
Kif6NP_796026.2 KISc_KIF9_like 5..343 CDD:276826 105/347 (30%)
Kinesin 11..345 CDD:278646 103/375 (27%)
Cob_adeno_trans <350..>408 CDD:294596 18/101 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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