DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and Klp3A

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster


Alignment Length:1582 Identity:333/1582 - (21%)
Similarity:570/1582 - (36%) Gaps:512/1582 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTKNASSIQVCIKVRP-CEPGLTSLWQVKEGRSI----QLADSHAEPYVFDYVFDEGASNQEVF 60
            ||:::.|.:.|.::||| .:..|....::...||.    |:..:..|.|.::||||...|.:::|
  Fly     1 MSSEDPSCVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLF 65

  Fly    61 DRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGD------EQNPGVMVLAAKEIFQQISS-ET 118
            :...:..|...:.|.|.||.|||||.|||||| ||.      :.:.||:..|..:||..|:. ::
  Fly    66 ETCVQAKVKKLLNGYNVTILAYGQTGSGKTYT-MGTAFNGVLDDHVGVIPRAVHDIFTAIAEMQS 129

  Fly   119 ERDFLLRVGYIEIYNEKIYDLLNKKNQD---LKIHESGNGIVNVNCKESIVTSEDDLLRQLYMGN 180
            |..|.:...::|:|.|:.|||.:.|.:|   :.|.|..|.|:.....|.:|||...:...|..|:
  Fly   130 EFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVTDHLIRGS 194

  Fly   181 KERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQV----------- 234
            ..|.|..|.|||.||||||||.:.:.:.|.|  ...:|..|..:||||||||:.           
  Fly   195 AGRAVAATAMNETSSRSHAIFTLTLVATKLD--GKQSVTTSRFNLVDLAGSERCSKTLASGDRFK 257

  Fly   235 DPADHASSLMIFRNLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLTSIICTITPS--FVEES 297
            :..:....|:...|::.:|.....:....:|.|||.|::..|||||.:|.:|..::|:  .|.|:
  Fly   258 EGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAET 322

  Fly   298 SSTISFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNESQLVLQELEGRIKR 362
            .||:.:...|.:|:.|| |..:|....       .::||||.:.|.:::..|       .|::..
  Fly   323 LSTLRYADRALQIKNKP-VVNLDPHAA-------EVNMLKDVIQKLRVELLS-------GGKMSS 372

  Fly   363 DMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPKPLFQRRG 427
            .::..|.:|.|.                         |:|                         
  Fly   373 SLISAVGAAGLG-------------------------AIP------------------------- 387

  Fly   428 IAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDAPQTEISA 492
                                                                   |:      .:
  Fly   388 -------------------------------------------------------CE------ES 391

  Fly   493 LTASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEELLSSISEKD 557
            |..|...|.| |::.:|||:.|::...:|:.|                                 
  Fly   392 LAGSMANAAE-IQRLKEQVRTLQDRNRKLQQE--------------------------------- 422

  Fly   558 STIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELERLLPLASASGLDSVACQ 622
                 |.|||.:|:        |.:||:...|.                               .
  Fly   423 -----LHQSLLDLT--------EKEMRAHIAEQ-------------------------------A 443

  Fly   623 FDQLRSEIAATRMKLESMLSTFSHASCEVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLKHKWS 687
            .|:|||.::..:.||:.                      .||.     .||  .|..|.      
  Fly   444 HDKLRSHVSELKNKLDQ----------------------REQA-----QFG--NENTNG------ 473

  Fly   688 SQKLAIDTMQVDYN-TIQQKYLQLQDEYRHLELRSDEQCQQLQDENSKLQAEIGTLKERVEEIHS 751
                  |....|:: .:.:.:::||.....||.:..|..|:|...:.....|.|.     :|:| 
  Fly   474 ------DNEMRDFSLLVNRVHVELQRTQEELESQGHESRQRLSSRSHTEGGESGG-----DEVH- 526

  Fly   752 ELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTIQECDALREEHKQRT 816
            |:|.     :|.|                  |:...|:|:   :.||.:..::.|..:|.|::..
  Fly   527 EMLH-----SHSE------------------EYTNKQMNF---AGELRNINRQLDLKQELHERIM 565

  Fly   817 TN-----SDLESMKSSGVGTECSDPENELDTDLLQQFTKL-SKSIQQIELTDYSGGRRLFIYNHA 875
            .|     ||.|.:|......:..|.|.| ..||:.|...: ||.|                    
  Fly   566 RNFSRLDSDDEDVKLRLCNQKIDDLEAE-RRDLMDQLRNIKSKDI-------------------- 609

  Fly   876 EQDQSVPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVKINQEQNLVKEEDRMRDII 940
                   |.||..|..|.|:  ..:.:.||         .:|    |:..:.||:|..|:.|:.|
  Fly   610 -------SAKLAEERRKRLQ--LLEQEISD---------LRR----KLITQANLLKIRDKEREKI 652

  Fly   941 FQLKQEVDGKKNLIEEEKEVINNLRAQITSLNQIETIKNQNAKTKILCEELQTKDTVQTANKQES 1005
            ..|..|:   :.:.|.:.::|..:|.:.....|.:.::.:.      ..:|::||     .|.:|
  Fly   653 QNLSTEI---RTMKESKVKLIRAMRGESEKFRQWKMVREKE------LTQLKSKD-----RKMQS 703

  Fly  1006 QEV--LTLKTSLAHLKSKVCE--------LQKKLEKQSEDEKISELQSDIGEISECCLSMELKLA 1060
            :.|  .||.:....:..:.||        |:..||:|:..:.......|.|..:....:...|..
  Fly   704 EIVRQQTLHSKQRQVLKRKCEEALAANKRLKDALERQASAQAQRHKYKDNGGSAAGSSNANAKTD 768

  Fly  1061 DIVNWQAEEL----------RPLDQLQESGVELQHHSTTAEESLNVEKPIQEQT-ERTLTTEYER 1114
               :|...||          ..|:||.|....:.:|....:         ||:| :.....|..|
  Fly   769 ---SWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQ---------QEKTSDPAEAAEQAR 821

  Fly  1115 RIEQLEESLQRAQEELSILEKRKTDENKSLQLEYMAKIETSENENRSKFRAYCLDLKETQKRYEE 1179
            .:..|||.|:....::|.|:::....:...::..:|:...|..|:|:..:.....|.:.::....
  Fly   822 ILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEGVQSLGESRTVSKQLLKTLVQQRRLQAS 886

  Fly  1180 QLQQ---TNEKLASVTTQCQVHLDVIKRSLQEKITQAEKERNELAVRHKAELEKIRETLKEKESS 1241
            .|.:   |.::|.:.....|...|...:.|  ::.|::.|...|| :.:|..||:...::.....
  Fly   887 SLNEQRTTLDELRAQLLDAQQQEDAASKRL--RLLQSQHEEQMLA-QQRAYEEKVSVLIRTANQR 948

  Fly  1242 YKEKLRQAEEERDKEISRLEVMRNTIAELHKTNSDREVELEGVKMEKCQLKKLYDKSMLELEQLQ 1306
            :.|....||:::          ||.|  |.:..|.||...:                  ||::|:
  Fly   949 WAEARSPAEDQQ----------RNQI--LEELLSSREALQQ------------------ELDKLR 983

  Fly  1307 CTADQKSSDLLPGSSNENIDDLQKKCDQYVQDLELLRGEKAELLSEI-------------QKING 1358
              |..||......|..:::||          ..:::.|.:..:||::             ::|..
  Fly   984 --AKNKSKSKAVKSEPQDLDD----------SFQIVDGNETVVLSDVSDDPDWVPSTSKSKRIQS 1036

  Fly  1359 QHSNTIKKLEEIEAEMITLTTQKELERCEIAEKLETFKSKEA--DIKEALHCAQLRLHAYDKLVC 1421
            ...|.|...|:.:|.:.:|..          ..:::..|..|  |.|....|.       .:..|
  Fly  1037 DSRNVISPPEKQDANVTSLGN----------SSIQSLNSTSATEDGKRCKGCK-------CRTKC 1084

  Fly  1422 EYERLKGCLSDSNKLSE------------NLQKKVERLHAEQLALQEGISGRDSEIKQLRSELKD 1474
            ..:|. ||||.:|..||            ||:.     ||.|..  :| .|:..|.:.......|
  Fly  1085 TTKRC-GCLSGNNACSETCVCKSNCRNPLNLKD-----HASQCG--DG-DGQKDETEDADKSDDD 1140

  Fly  1475 AIDENKTVREAKVGLENSLKAV 1496
            ..||.:|.:      ||::|.|
  Fly  1141 GDDEPQTSK------ENAVKFV 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 110/335 (33%)
Motor_domain 8..310 CDD:277568 107/329 (33%)
SMC_prok_B <471..1270 CDD:274008 154/829 (19%)
Mplasa_alph_rch 924..1647 CDD:275316 124/624 (20%)
CENP-H 1204..>1266 CDD:283493 12/61 (20%)
CALCOCO1 <1489..1850 CDD:285171 4/8 (50%)
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 108/331 (33%)
Kinesin 14..335 CDD:278646 106/323 (33%)
Smc <396..>994 CDD:224117 161/852 (19%)
FlaC 522..633 CDD:225888 36/181 (20%)
TCR 1075..1110 CDD:281618 10/42 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437986
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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