DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and klp3

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_594686.1 Gene:klp3 / 2542195 PomBaseID:SPAC1834.07 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:628 Identity:180/628 - (28%)
Similarity:268/628 - (42%) Gaps:144/628 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPCEPGLTSLWQVKEGRSI--QLADS--HAEP------YVFDYVFDEGASNQEVFD 61
            :||:|..::||    ...|.|...|.::  .|.||  |.|.      :|||.||...::..::|.
pombe     2 TSIKVVCRIRP----TNQLEQDLGGNNVIYPLNDSTVHIETSDYSGNFVFDRVFHPSSTQNDIFS 62

  Fly    62 RMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQN---PGVMVLAAKEIFQQI-SSETERDF 122
            ...:..|.....|.|||:.|||||.|||||||||.|.|   .|:.....:.||.:| .|.:..::
pombe    63 YSIESTVDDLFLGYNGTVLAYGQTGSGKTYTMMGIENNFEKEGMTPRMLRRIFDKIRDSPSTTEY 127

  Fly   123 LLRVGYIEIYNEKIYDLLNKKNQDLKIHESG-NGIVNVNCKESIVTSEDDLLRQLYMGNKERVVG 186
            .::|.|:|||.|||:|||::||..|.:||.. .|:.....|...|:||.:.|..|..|...|.|.
pombe   128 EVKVSYMEIYMEKIHDLLSEKNDRLTVHEDKLQGVYVQGLKTIYVSSETEALDILNKGMGSRAVA 192

  Fly   187 ETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPADHAS---------- 241
            .|:||.:|||||:||  ::|..::|....:| ::..|.||||||||.|..:....          
pombe   193 STSMNAQSSRSHSIF--VLEVVQTDTESGET-RRGRLFLVDLAGSESVGKSGAVGQTLEEAKKIN 254

  Fly   242 -SLMIFRNLVKSLSESVDSKPN--SFRDSKLPRIMLPSLGGNVLTSIICTITPSF--VEESSSTI 301
             ||.....::.||:   |||.:  .:|||||.||:..|||||..|::|...:|..  ..|:.||:
pombe   255 RSLSTLGMVINSLT---DSKLSHVPYRDSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTL 316

  Fly   302 SFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAK----KKIKN--------------E 348
            .||..||.|:.|..|....|...|.|||    .:.||.|::    .:|.|              |
pombe   317 RFGHRAKSIKNKAVVNSELSVDEMKRQL----YIYKDALSRCVCGARINNNLDYNNCHSNVWSGE 377

  Fly   349 SQLVLQELEGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLA------LPEPEES 407
            ..|.|..|           ...::|.:..:.:..|  |:..|.::.|...:|      ......:
pombe   378 HSLTLSNL-----------AEKSNLKEAEIIQGNR--TIQESNNDRDESTVASIHRHNFDSDSIN 429

  Fly   408 RLPRPSKLTNLPKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMM 472
            ||...::|     .|.||.|:          |...:.|..::.|..|.|::              
pombe   430 RLYAEAQL-----ELKQRDGV----------LSSTKQQLSDLMTALGDAQE-------------- 465

  Fly   473 SKKYQESVPNCDAPQTEISALTASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFET 537
              :|.|.|.|    ....|.|||:|.:..:.....|::.|......||                 
pombe   466 --RYVELVKN----HRVNSNLTANNSLNDKPGFTIEQKDKNFSINNER----------------- 507

  Fly   538 HKAKSKQMEEELLSSISEKDSTIVSLQQSLEELSRDVLRNSKE 580
                     ...|..:|..||::.:|.....:|.:.::  |||
pombe   508 ---------NNFLQKLSTLDSSLAALVNVQRKLIKALI--SKE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 125/337 (37%)
Motor_domain 8..310 CDD:277568 123/331 (37%)
SMC_prok_B <471..1270 CDD:274008 22/110 (20%)
Mplasa_alph_rch 924..1647 CDD:275316
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
klp3NP_594686.1 KIP1 1..546 CDD:227392 180/628 (29%)
KISc_KHC_KIF5 1..325 CDD:276820 123/332 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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