DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and tea2

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_596620.1 Gene:tea2 / 2539857 PomBaseID:SPBC1604.20c Length:628 Species:Schizosaccharomyces pombe


Alignment Length:536 Identity:146/536 - (27%)
Similarity:249/536 - (46%) Gaps:83/536 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPC--EPGLTSLWQVKE---GRSI---QLADSHA---EPYVFDYVFDEGASNQEVF 60
            |.|...|::||.  ..|:.|..::..   ||..   |.:.|.:   :.|:|:.||...:.|.:::
pombe   131 SGIITSIRIRPIGKNQGVWSHGKLSNDPYGREYIRQQTSTSSSTIQQEYLFNNVFGMESKNYDIY 195

  Fly    61 DRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETERD-FLL 124
            .|..|.:|.....|.||.:||||.|.:||||:|.|.|..||::.||..::|:.:.:.::.| |.:
pombe   196 KRSVKSVVRNVFSGYNGIVFAYGMTGTGKTYSMQGTENEPGIIPLAMNDLFEMVENNSDDDTFQI 260

  Fly   125 RVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNVN-CKESIVTSEDDLLRQLYMGNKERVVGET 188
            |:.|:|||||:|.||:...:::.:|.|:.:|.|||. ....:|||.:::.:.:...|..|....|
pombe   261 RISYLEIYNERIRDLIGNSDEEPRIRENASGEVNVTPLTRVLVTSPEEVSQVIEQCNAIRKTAAT 325

  Fly   189 NMNERSSRSHAIFRI-IIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPADHA---------SSL 243
            :.|..|||||||.:: :|.:..:.|    |.:.|.||||||||||:.. |.|.         .||
pombe   326 DFNTYSSRSHAILQVFLIRNNPTAH----TSQISSLSLVDLAGSERAS-AHHERRKEGAFINKSL 385

  Fly   244 MIFRNLVKSLSESVDSKPNS------FRDSKLPRIMLPSLGGNVLTSIICTIT--PSFVEESSST 300
            :....::..||.:.:....|      :|:|||.|::..||.|....|::.||:  .:...|:::|
pombe   386 LTLGTVISRLSAAANPSLTSNSGHIPYRESKLTRLLQQSLSGQSQISLLATISIESNHTMETTNT 450

  Fly   301 ISFGTCAKKIRCKPQ-VCKIDSETTMMRQLDRGISMLKDKLAK--KKIKNESQLVLQ---ELEGR 359
            :.|.:.|:.:   || :.:.::.|.:..:|    :.|...|.|  ::::..:.||.|   :||.|
pombe   451 LKFASRAQNL---PQDIRQAEAVTNVQAEL----ASLHSALEKNAQEVEYYASLVKQLTSDLEER 508

  Fly   360 IKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPKPLFQ 424
                          |.|...       |.|..|:|.|...|....||.......::.:|...|..
pombe   509 --------------DTYIAM-------LEAERSQGTAISRARLRMEELLSDHNFEIADLRDELQD 552

  Fly   425 RRGIAPKAKGICKTLKEKRLQTDNMD------TMPGRAKQLGRETASRIPSVMMSKKYQESVPNC 483
            :       :.|...|:..:.|.|..|      ..|.:..:......||..|...|.:.:..:...
pombe   553 K-------EQIIYALRYAQKQRDIADFNQSLAKFPHKILKKNVTRGSRSSSDQFSNETKTEILPD 610

  Fly   484 DAPQTEISALTASNQV 499
            |..|::..::|...|:
pombe   611 DQQQSKKDSVTQETQL 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 108/339 (32%)
Motor_domain 8..310 CDD:277568 106/332 (32%)
SMC_prok_B <471..1270 CDD:274008 5/29 (17%)
Mplasa_alph_rch 924..1647 CDD:275316
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
tea2NP_596620.1 Motor_domain 133..460 CDD:277568 106/331 (32%)
Kinesin 138..459 CDD:278646 104/325 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101662
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.800

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