DRSC/TRiP Functional Genomics Resources

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Protein Alignment cana and Kif18a

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:XP_006499322.1 Gene:Kif18a / 228421 MGIID:2446977 Length:919 Species:Mus musculus


Alignment Length:1014 Identity:230/1014 - (22%)
Similarity:399/1014 - (39%) Gaps:288/1014 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YVFDYVFDEGASNQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAK 108
            :|||.||||.::..|||:...|.|:|:.:.|.|.|:||||.|.||||:||:|....||||.|...
Mouse    74 FVFDAVFDETSTQMEVFEHTTKPILHSFLNGYNCTVFAYGATGSGKTHTMLGSAAEPGVMYLTML 138

  Fly   109 EIFQQISS-ETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNVNCKESIVTSEDDL 172
            ::|:.|.. :.|::....|.|:|:|||:|.|||..........:|..|:|..........|.:::
Mouse   139 DLFKCIDEIKEEKECSTAVSYLEVYNEQIRDLLTNSGPLAVREDSQKGVVVQGLTLHQPKSSEEI 203

  Fly   173 LRQLYMGNKERVVGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQ---- 233
            |:.|..|||.|....|::|..||||||:|:|.:..:....|.|..|:.:.:||:||||||:    
Mouse   204 LQLLDNGNKNRTQHPTDVNAVSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASVS 268

  Fly   234 -------VDPADHASSLMIFRNLVKSLSESVDSKPNS---FRDSKLPRIMLPSLGGNVLTSIICT 288
                   |:..:...||:...|::.:|:.:  .:.|.   :|:|||.|::..|||||..|.:|..
Mouse   269 GAKGSRFVEGTNINKSLLALGNVINALANT--KRRNQHIPYRNSKLTRLLKDSLGGNCQTIMIAA 331

  Fly   289 ITPS--FVEESSSTISFGTCAKKIR--CKPQVCKIDSETTM------MRQLDRGISMLKDKLAKK 343
            ::||  |.:::.:|:.:...||:|:  .|..|..::|..:.      |::.:  |.|||:||.  
Mouse   332 VSPSSLFYDDTYNTLKYANRAKEIKSSLKSNVLNLNSHISQYVKICNMQKAE--ILMLKEKLK-- 392

  Fly   344 KIKNESQLVLQELEGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESR 408
              ..|.|..|.:     :.|..|:|.|                                .||:..
Mouse   393 --AYEEQKALSD-----RNDCAKLVHS--------------------------------NPEDRE 418

  Fly   409 LPRPSKLTNLPKPLFQ-RRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMM 472
            ..|..::.|.   ||| |.||..:...:...||...|:                           
Mouse   419 TERFQEILNC---LFQNREGIRQEYLKLEMLLKANALK--------------------------- 453

  Fly   473 SKKYQESVPNCDAPQTEISALTASNQVAKET----------------IEKYEEQV-KRLKETIER 520
            |..:|:    |   ..:|..:.:.::|.|.|                :||.:|:| |:..|....
Mouse   454 SSYHQQ----C---HKQIEMMCSEDKVEKATCKRDHRLEKLKTNSCFLEKKKEEVSKQFDENTNW 511

  Fly   521 LEMENGKAVNLGEQFETHKAKSKQM--------EEELLSSISEKDSTIVSLQQSLEELSRDVLRN 577
            |.....:...||:..:..:|.:|::        .:||.:.::.. :.:..||:...:.:..||  
Mouse   512 LHRVENEMRLLGQNGDIPEALNKELHCHHLHLQNKELKTQMAHM-TALACLQEQQHKQTEAVL-- 573

  Fly   578 SKEDQMRSMCPELESSCERICNKCLELERLLPLASASGLDSVACQFDQLRSEIAATRMKLE---- 638
                  .::.|.|.....::              ..:||.:.|...|....|....|.|:.    
Mouse   574 ------NALLPVLRKQYWKL--------------KETGLSNAAFDSDFKDIEHLVERKKVVAWAD 618

  Fly   639 --------------SMLSTFSHASCEVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLK---HKW 686
                          |:|.||  ...|..|..:.|..:|:.               |.||   .:.
Mouse   619 QTNEHSNRNDLPGISLLMTF--PQLEPIQSISCCTSVSDP---------------NVLKLTPQRR 666

  Fly   687 SSQKLAIDTMQVDYNTIQQKYLQLQDEYRHLELRSDEQCQQLQDENSK-LQAEIGTLKE--RVEE 748
            :.:|:....::|                :|.:..:..:..||.|..|| ||..:.|.::  :.::
Mouse   667 TRRKIIPSPLKV----------------QHTQKSALSESTQLNDSFSKELQPIVYTPEDCKKAQD 715

  Fly   749 IHSELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTIQECDALR---- 809
            :...|..     |..:...:.|...:|.|.:::......    || ...|.||...||::|    
Mouse   716 LFPSLTR-----TSSQSANVMNDNSQKALCRIESPLSRT----EC-KQGLYSTSTLCDSIRGLKN 770

  Fly   810 ---EEHKQRTTNSDLESMKSSGVGTECSDPENELDTDLLQQFTKLSKSIQQIELTDYSGGRRLFI 871
               |:....::.|.:..::||...|:.|.||:......:...|...:..:|:..|          
Mouse   771 KWPEQEPLASSKSSVHRIESSSFSTKDSMPESAGVPSYMAMTTAAKRKWKQMSST---------- 825

  Fly   872 YNHAEQDQSVPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVKINQEQNLVK--EED 934
                 .:.|:.|.:.|                       ||.|       :|.::.:.||  :|:
Mouse   826 -----SNASIKSDESC-----------------------GFAK-------RIRRDNSSVKPMQEN 855

  Fly   935 RMRDIIFQLKQEVDGK------KNLIEEEKEVINNLRAQ 967
            |::.|     :|:..|      :||.|..::.:.|.:.|
Mouse   856 RLKAI-----KEIPTKQIQTCLENLEETLQKKMYNKKNQ 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 103/290 (36%)
Motor_domain 8..310 CDD:277568 101/282 (36%)
SMC_prok_B <471..1270 CDD:274008 98/561 (17%)
Mplasa_alph_rch 924..1647 CDD:275316 12/52 (23%)
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
Kif18aXP_006499322.1 KISc_KIP3_like 11..355 CDD:276821 101/282 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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