DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and klp-13

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001360738.1 Gene:klp-13 / 180865 WormBaseID:WBGene00002224 Length:678 Species:Caenorhabditis elegans


Alignment Length:735 Identity:177/735 - (24%)
Similarity:313/735 - (42%) Gaps:169/735 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRPCEPGLTSLWQVK-----EGRSIQLAD-------------SHAEPYVFDYVFDEGAS 55
            :.|.::|||...|..|....:     :.:.:.|.|             .|...:.||..|...::
 Worm     8 LTVVVRVRPLNSGEKSRKAFQCVFPLDKKRVLLVDPEKFENNILRQNRQHERKFEFDASFGATSN 72

  Fly    56 NQEVFDRMAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETER 120
            .::|.:.....|:.:.::|.|.|:||||.|.||||:||:|.:..||:|.|..|.:::::.::   
 Worm    73 QEDVHETTTGPIIDSVVEGFNATVFAYGATGSGKTFTMIGTKDRPGLMTLMTKTLYEKLDNQ--- 134

  Fly   121 DFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNVNCKESI-VTSEDDLLRQLYMGNKERV 184
             :.:.:.|:|||||.|.||||....||::.|...|.:.|....|: ..:...:::.|..||..|.
 Worm   135 -YQVLLSYMEIYNEIIRDLLNPSGGDLELLEDERGNIRVPGLSSVKAPNLTRIMQILQEGNLRRT 198

  Fly   185 VGETNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPADHAS-------- 241
            ...|..|:.||||||:.:::|...:|.||.        |.::||||||:.....:..        
 Worm   199 QEATMANKTSSRSHALLQVMIVKNQSLHSK--------LFMIDLAGSERASNTQNRGIRLKEGAA 255

  Fly   242 ---SLMIFRNLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLTSIICTITPSF--VEESSSTI 301
               ||:...|::.||: |..:|..::|||||.|::..||||...|.:|..:|||.  .||:.:|:
 Worm   256 INRSLLALGNVINSLA-SKTTKFVNYRDSKLTRLLKDSLGGTAKTCMIAHVTPSSSNFEETYNTL 319

  Fly   302 SFGTCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNESQLVLQELEGRIKRDMLK 366
            .:.:.|..|..||...:..|...:..:....|.    |....:|||.|.:.             .
 Worm   320 MYASRAMNITNKPMRNRPASADQVYAEAMNAIR----KEVGSQIKNSSSIT-------------G 367

  Fly   367 IVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPKPLFQRRGIAPK 431
            :.:.:|:.: |...|.|..:::                      |.|.||...:|:...||   :
 Worm   368 LAARSSVQE-RSSSRNRPKSIS----------------------RNSSLTRAAQPMPIDRG---R 406

  Fly   432 AKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDAPQTEISALTAS 496
            ...:...|||:.:      |:..:.|:| ||.       :|:       .|.:|...|:|.::.:
 Worm   407 GGSLFTQLKEQYM------TLSDKQKRL-REK-------LMA-------TNQEAYSLEMSLISKN 450

  Fly   497 ---NQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEELLSSISEKDS 558
               |...|...:|..|.::|||:.   .|::..:.|.|.:| .|...|:.:..||..|.:..:..
 Worm   451 AIINAWEKHHHDKTAESIERLKKD---GELQRVRLVELSDQ-RTKVEKALRKGEENASGLESRMR 511

  Fly   559 TIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELERLLPLASASGLDSVACQ- 622
            ::.|             .|.:.:.::.|....|...::|                |.|..:|.: 
 Worm   512 SLAS-------------TNEQREVVKLMVKMAEIEAQKI----------------SALSDLAIRG 547

  Fly   623 --FDQLRSEIAATRMKLESMLSTFSHASCEVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLKHK 685
              .|:..:.||..: |.|.           |:.|..|.| |.:      :|..:|:|:|..:|::
 Worm   548 LIMDRTDTSIAKLQ-KYEM-----------VADKLIDGK-LDD------NDRKKLEEEYRVIKNQ 593

  Fly   686 WSSQKLAIDTMQ--VDYNTI 703
            :....|.:..:|  |.:|::
 Worm   594 FHYHLLPLKNIQTTVSWNSM 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 103/338 (30%)
Motor_domain 8..310 CDD:277568 100/332 (30%)
SMC_prok_B <471..1270 CDD:274008 48/241 (20%)
Mplasa_alph_rch 924..1647 CDD:275316
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
klp-13NP_001360738.1 Motor_domain 7..328 CDD:354959 100/332 (30%)
iSH2_PI3K_IA_R 413..>513 CDD:355389 29/124 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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